STRINGSTRING
T265_05629 T265_05629 T265_06068 T265_06068 T265_03110 T265_03110 T265_05975 T265_05975 T265_05313 T265_05313 T265_08989 T265_08989 T265_13996 T265_13996
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T265_05629Uncharacterized protein. (876 aa)
T265_06068Uncharacterized protein. (475 aa)
T265_03110SB domain-containing protein. (578 aa)
T265_05975SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (766 aa)
T265_05313Uncharacterized protein. (1440 aa)
T265_08989Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)
T265_13996ABC transmembrane type-1 domain-containing protein. (480 aa)
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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