27 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12658	Uncharacterized protein. (165 aa)
	T265_06212	ER lumen protein-retaining receptor. (450 aa)
	T265_00469	Uncharacterized protein. (176 aa)
	T265_08759	Uncharacterized protein. (299 aa)
	T265_00559	Uncharacterized protein. (206 aa)
	T265_01438	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (645 aa)
	T265_12736	Uncharacterized protein. (135 aa)
	T265_01128	AN1-type domain-containing protein. (160 aa)
	T265_01855	TPR_REGION domain-containing protein. (249 aa)
	T265_12940	Uncharacterized protein. (147 aa)
	T265_13044	SRP72 domain-containing protein. (660 aa)
	T265_13830	Uncharacterized protein. (364 aa)
	T265_03194	Uncharacterized protein. (748 aa)
	T265_12290	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (229 aa)
	T265_14118	Uncharacterized protein. (866 aa)
	T265_04766	SRP54 domain-containing protein. (803 aa)
	T265_05503	Uncharacterized protein. (190 aa)
	SRP54	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (518 aa)
	T265_11610	SEC63 domain-containing protein. (858 aa)
	T265_15429	Plug_translocon domain-containing protein. (500 aa)
	T265_15299	ER lumen protein-retaining receptor. (171 aa)
	T265_09958	Uncharacterized protein. (263 aa)
	T265_05888	TLC domain-containing protein. (298 aa)
	T265_14653	Uncharacterized protein. (220 aa)
	T265_08615	Sec16_C domain-containing protein. (1743 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_08733	Uncharacterized protein. (161 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SRP54	T265_00469	A0A074ZG59	A0A075ACT4	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.949
SRP54	T265_03194	A0A074ZG59	A0A074ZTA6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.999
SRP54	T265_04766	A0A074ZG59	A0A074ZMN6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	SRP54 domain-containing protein.	0.997
SRP54	T265_05503	A0A074ZG59	A0A074ZJE9	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.554
SRP54	T265_11610	A0A074ZG59	A0A074YYG7	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	SEC63 domain-containing protein.	0.706
SRP54	T265_12290	A0A074ZG59	A0A074ZSY6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.767
SRP54	T265_12940	A0A074ZG59	A0A074ZX75	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.465
SRP54	T265_13044	A0A074ZG59	A0A074ZVH1	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	SRP72 domain-containing protein.	0.999
SRP54	T265_13830	A0A074ZG59	A0A074ZV83	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.511
SRP54	T265_15429	A0A074ZG59	A0A074YZ28	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Plug_translocon domain-containing protein.	0.767
T265_00469	SRP54	A0A075ACT4	A0A074ZG59	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.949
T265_00469	T265_03194	A0A075ACT4	A0A074ZTA6	Uncharacterized protein.	Uncharacterized protein.	0.949
T265_00469	T265_04766	A0A075ACT4	A0A074ZMN6	Uncharacterized protein.	SRP54 domain-containing protein.	0.998
T265_00469	T265_05503	A0A075ACT4	A0A074ZJE9	Uncharacterized protein.	Uncharacterized protein.	0.660
T265_00469	T265_11610	A0A075ACT4	A0A074YYG7	Uncharacterized protein.	SEC63 domain-containing protein.	0.739
T265_00469	T265_12290	A0A075ACT4	A0A074ZSY6	Uncharacterized protein.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.623
T265_00469	T265_13044	A0A075ACT4	A0A074ZVH1	Uncharacterized protein.	SRP72 domain-containing protein.	0.940
T265_00469	T265_13830	A0A075ACT4	A0A074ZV83	Uncharacterized protein.	Uncharacterized protein.	0.505
T265_00469	T265_15429	A0A075ACT4	A0A074YZ28	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.623
T265_00559	T265_01438	A0A075A5W9	A0A074ZZR0	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.461