STRINGSTRING
T265_00723 T265_00723 T265_09389 T265_09389 T265_05477 T265_05477 T265_05375 T265_05375 T265_04148 T265_04148 T265_12451 T265_12451 T265_07666 T265_07666
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T265_00723Uncharacterized protein. (820 aa)
T265_09389CULLIN_2 domain-containing protein. (1718 aa)
T265_05477Uncharacterized protein. (845 aa)
T265_05375UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (205 aa)
T265_04148Proteasome/cyclosome repeat protein. (2834 aa)
T265_12451UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (156 aa)
T265_07666ANAPC4_WD40 domain-containing protein. (554 aa)
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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