(123 nodes) Cell-cell adhesion network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15781	Uncharacterized protein. (135 aa)
	T265_15709	Ig-like domain-containing protein. (359 aa)
	T265_15937	Uncharacterized protein. (137 aa)
	T265_12155	Uncharacterized protein. (189 aa)
	T265_11035	Uncharacterized protein. (1380 aa)
	T265_11076	Uncharacterized protein. (1263 aa)
	T265_15323	Uncharacterized protein. (799 aa)
	T265_15620	Integrin_alpha2 domain-containing protein. (580 aa)
	T265_10723	Uncharacterized protein. (1656 aa)
	T265_10411	Uncharacterized protein. (327 aa)
	T265_10413	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1021 aa)
	T265_10050	Uncharacterized protein. (1336 aa)
	T265_11036	Uncharacterized protein. (354 aa)
	T265_09532	EGF-like domain-containing protein. (637 aa)
	T265_10412	Uncharacterized protein. (94 aa)
	T265_08638	Uncharacterized protein. (506 aa)
	T265_14928	Uncharacterized protein. (1708 aa)
	T265_08202	Uncharacterized protein. (1409 aa)
	T265_09415	Ig-like domain-containing protein. (829 aa)
	T265_11034	Uncharacterized protein. (917 aa)
	T265_07933	Fibronectin type-III domain-containing protein. (799 aa)
	T265_10976	Uncharacterized protein. (1757 aa)
	T265_10845	Uncharacterized protein. (1209 aa)
	T265_00058	Uncharacterized protein. (1251 aa)
	T265_12449	Uncharacterized protein. (429 aa)
	T265_07579	Uncharacterized protein. (442 aa)
	T265_14227	Uncharacterized protein. (484 aa)
	T265_14225	Uncharacterized protein. (1532 aa)
	T265_07195	Uncharacterized protein. (875 aa)
	T265_14491	CA domain-containing protein. (379 aa)
	T265_06544	Uncharacterized protein. (1115 aa)
	T265_09472	Uncharacterized protein. (2039 aa)
	T265_06262	Uncharacterized protein. (605 aa)
	T265_06179	Uncharacterized protein. (433 aa)
	T265_14777	Uncharacterized protein. (905 aa)
	T265_05857	Uncharacterized protein. (349 aa)
	T265_05574	Uncharacterized protein. (128 aa)
	T265_05738	Uncharacterized protein. (1737 aa)
	T265_05646	Uncharacterized protein. (2307 aa)
	T265_05498	Uncharacterized protein. (383 aa)
	T265_05443	Uncharacterized protein. (209 aa)
	T265_13742	Uncharacterized protein. (867 aa)
	T265_05267	Uncharacterized protein. (1274 aa)
	T265_13982	Uncharacterized protein. (786 aa)
	T265_08103	Ig-like domain-containing protein. (591 aa)
	T265_05098	FERM domain-containing protein. (2865 aa)
	T265_04911	Uncharacterized protein. (1373 aa)
	T265_13950	Uncharacterized protein. (957 aa)
	T265_04735	Uncharacterized protein. (3425 aa)
	T265_14420	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (2367 aa)
	T265_04859	Uncharacterized protein. (1115 aa)
	T265_05858	Uncharacterized protein. (802 aa)
	T265_13478	Uncharacterized protein. (991 aa)
	T265_04286	Uncharacterized protein. (1013 aa)
	T265_14226	Uncharacterized protein. (1035 aa)
	T265_14228	Uncharacterized protein. (2100 aa)
	T265_06647	Uncharacterized protein. (1407 aa)
	T265_03192	EGF-like domain-containing protein. (252 aa)
	T265_04321	Uncharacterized protein. (154 aa)
	T265_03229	Uncharacterized protein. (970 aa)
	T265_03261	Uncharacterized protein. (863 aa)
	T265_04037	Uncharacterized protein. (1238 aa)
	T265_15900	PDZ domain-containing protein. (162 aa)
	T265_05851	Uncharacterized protein. (1278 aa)
	T265_02573	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (2801 aa)
	T265_13089	Uncharacterized protein. (901 aa)
	T265_03739	Uncharacterized protein. (429 aa)
	T265_13022	Uncharacterized protein. (941 aa)
	T265_02206	Uncharacterized protein. (1757 aa)
	T265_12916	Uncharacterized protein. (519 aa)
	T265_13740	Uncharacterized protein. (737 aa)
	T265_03191	Uncharacterized protein. (743 aa)
	T265_13176	Uncharacterized protein. (1410 aa)
	T265_01999	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1229 aa)
	T265_04853	Uncharacterized protein. (1456 aa)
	T265_02662	Uncharacterized protein. (1403 aa)
	T265_01760	Uncharacterized protein. (954 aa)
	T265_01453	Uncharacterized protein. (798 aa)
	T265_01779	Uncharacterized protein. (1661 aa)
	T265_02498	Uncharacterized protein. (537 aa)
	T265_12724	Uncharacterized protein. (1287 aa)
	T265_12793	Uncharacterized protein. (972 aa)
	T265_02215	Uncharacterized protein. (1317 aa)
	T265_13465	Uncharacterized protein. (122 aa)
	T265_00871	Uncharacterized protein. (291 aa)
	T265_02008	Uncharacterized protein. (1698 aa)
	T265_04203	Uncharacterized protein. (995 aa)
	T265_00703	Uncharacterized protein. (873 aa)
	T265_04114	Uncharacterized protein. (1423 aa)
	T265_03864	Uncharacterized protein. (1310 aa)
	T265_13331	Uncharacterized protein. (1133 aa)
	T265_00457	Uncharacterized protein. (1325 aa)
	T265_03818	Uncharacterized protein. (961 aa)
	T265_03625	Carboxylesterase. (646 aa)
	T265_01447	Uncharacterized protein. (1351 aa)
	T265_12723	Uncharacterized protein. (191 aa)
	T265_12464	Uncharacterized protein. (1352 aa)
	T265_03305	Uncharacterized protein. (1271 aa)
	T265_02871	Uncharacterized protein. (180 aa)
	T265_14776	CA domain-containing protein. (399 aa)
	T265_00151	Uncharacterized protein. (1711 aa)
	T265_02068	Fibronectin type-III domain-containing protein. (296 aa)
	T265_08410	Uncharacterized protein. (1204 aa)
	T265_08223	Uncharacterized protein. (1798 aa)
	T265_08102	Uncharacterized protein. (1020 aa)
	T265_14370	Uncharacterized protein. (398 aa)
	T265_14339	Uncharacterized protein. (1838 aa)
	T265_00705	Uncharacterized protein. (487 aa)
	T265_07193	Uncharacterized protein. (243 aa)
	T265_07041	Uncharacterized protein. (1492 aa)
	T265_05575	Uncharacterized protein. (114 aa)
	T265_03817	CA domain-containing protein. (413 aa)
	T265_03670	Uncharacterized protein. (608 aa)
	T265_02959	Integrin_alpha2 domain-containing protein. (1989 aa)
	T265_02870	Uncharacterized protein. (274 aa)
	T265_02540	Uncharacterized protein. (1645 aa)
	T265_02067	Uncharacterized protein. (468 aa)
	T265_12850	Uncharacterized protein. (1261 aa)
	T265_01778	Uncharacterized protein. (1527 aa)
	T265_12797	CA domain-containing protein. (508 aa)
	T265_01124	Uncharacterized protein. (1281 aa)
	T265_16328	Integrin_alpha2 domain-containing protein. (71 aa)
	T265_16247	Uncharacterized protein. (125 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00705	T265_06179	A0A075ABY8	A0A074ZH48	Uncharacterized protein.	Uncharacterized protein.	0.434
T265_00705	T265_14370	A0A075ABY8	A0A075AAU0	Uncharacterized protein.	Uncharacterized protein.	0.517
T265_00871	T265_04859	A0A075A0H8	A0A074ZMF5	Uncharacterized protein.	Uncharacterized protein.	0.588
T265_00871	T265_11076	A0A075A0H8	A0A074Z0A5	Uncharacterized protein.	Uncharacterized protein.	0.437
T265_01453	T265_12797	A0A074ZYP3	A0A075AJ13	Uncharacterized protein.	CA domain-containing protein.	0.439
T265_01760	T265_02206	A0A074ZYJ5	A0A074ZVR8	Uncharacterized protein.	Uncharacterized protein.	0.988
T265_01760	T265_07933	A0A074ZYJ5	A0A074ZB74	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.490
T265_01760	T265_08102	A0A074ZYJ5	A0A075A9K2	Uncharacterized protein.	Uncharacterized protein.	0.490
T265_01760	T265_08103	A0A074ZYJ5	A0A074ZLF0	Uncharacterized protein.	Ig-like domain-containing protein.	0.490
T265_01760	T265_11076	A0A074ZYJ5	A0A074Z0A5	Uncharacterized protein.	Uncharacterized protein.	0.516
T265_01778	T265_02067	A0A075AIS9	A0A075AII5	Uncharacterized protein.	Uncharacterized protein.	0.443
T265_01778	T265_02068	A0A075AIS9	A0A075A7R8	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.443
T265_01778	T265_04114	A0A075AIS9	A0A075A109	Uncharacterized protein.	Uncharacterized protein.	0.443
T265_01778	T265_12916	A0A075AIS9	A0A074ZW89	Uncharacterized protein.	Uncharacterized protein.	0.443
T265_01779	T265_02067	A0A074ZYQ0	A0A075AII5	Uncharacterized protein.	Uncharacterized protein.	0.443
T265_01779	T265_02068	A0A074ZYQ0	A0A075A7R8	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.443
T265_01779	T265_04114	A0A074ZYQ0	A0A075A109	Uncharacterized protein.	Uncharacterized protein.	0.443
T265_01779	T265_12916	A0A074ZYQ0	A0A074ZW89	Uncharacterized protein.	Uncharacterized protein.	0.443
T265_02067	T265_01778	A0A075AII5	A0A075AIS9	Uncharacterized protein.	Uncharacterized protein.	0.443
T265_02067	T265_01779	A0A075AII5	A0A074ZYQ0	Uncharacterized protein.	Uncharacterized protein.	0.443