70 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16117	Uncharacterized protein. (195 aa)
	T265_10082	DH domain-containing protein. (823 aa)
	T265_09871	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (208 aa)
	T265_10916	ATPase, AAA family; Belongs to the AAA ATPase family. (465 aa)
	T265_14757	Uncharacterized protein. (935 aa)
	T265_10336	Uncharacterized protein. (1463 aa)
	T265_15692	Uncharacterized protein. (79 aa)
	T265_14724	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (727 aa)
	T265_15024	Uncharacterized protein. (424 aa)
	T265_08541	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (467 aa)
	T265_08375	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (236 aa)
	T265_08425	Uncharacterized protein. (1067 aa)
	T265_08239	PDZ domain-containing protein. (1487 aa)
	T265_08108	Uncharacterized protein. (576 aa)
	T265_14323	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (573 aa)
	T265_07354	Uncharacterized protein. (71 aa)
	T265_10497	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (167 aa)
	T265_08424	Uncharacterized protein. (1213 aa)
	T265_14191	Uncharacterized protein. (294 aa)
	T265_08129	MTS domain-containing protein. (225 aa)
	T265_14157	Uncharacterized protein. (528 aa)
	T265_06608	Aldolase_II domain-containing protein. (713 aa)
	T265_06210	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (558 aa)
	T265_06179	Uncharacterized protein. (433 aa)
	T265_14723	Uncharacterized protein. (425 aa)
	T265_07025	Uncharacterized protein. (96 aa)
	T265_13813	Protein kinase domain-containing protein. (695 aa)
	T265_06211	Uncharacterized protein. (641 aa)
	T265_13894	Diacylglycerol kinase. (1360 aa)
	T265_05777	Uncharacterized protein. (533 aa)
	T265_14364	Uncharacterized protein. (843 aa)
	T265_05667	Uncharacterized protein. (648 aa)
	T265_04393	Uncharacterized protein. (1531 aa)
	T265_04286	Uncharacterized protein. (1013 aa)
	T265_03886	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (710 aa)
	T265_04893	Alpha-type protein kinase domain-containing protein. (961 aa)
	T265_04328	Uncharacterized protein. (1796 aa)
	T265_03229	Uncharacterized protein. (970 aa)
	T265_06223	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (503 aa)
	T265_13190	Uncharacterized protein. (241 aa)
	T265_03005	Uncharacterized protein. (1043 aa)
	T265_15900	PDZ domain-containing protein. (162 aa)
	T265_13119	DRBM domain-containing protein. (302 aa)
	T265_15691	Uncharacterized protein. (155 aa)
	T265_02258	Alpha-type protein kinase domain-containing protein. (784 aa)
	T265_12949	CUB domain-containing protein. (117 aa)
	T265_15416	Agenet-like domain-containing protein. (751 aa)
	T265_04969	Uncharacterized protein. (738 aa)
	T265_01519	Diacylglycerol kinase. (1321 aa)
	T265_10917	Uncharacterized protein. (1015 aa)
	T265_04392	Uncharacterized protein. (824 aa)
	T265_04273	Uncharacterized protein. (2443 aa)
	T265_13465	Uncharacterized protein. (122 aa)
	T265_04070	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (224 aa)
	T265_13369	Uncharacterized protein. (429 aa)
	T265_01854	ANK_REP_REGION domain-containing protein. (1002 aa)
	T265_03877	BTB domain-containing protein; Belongs to the potassium channel family. (367 aa)
	T265_00721	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (916 aa)
	T265_12526	KH_dom_type_1 domain-containing protein. (401 aa)
	T265_03503	Rho-GAP domain-containing protein. (1116 aa)
	T265_00019	Aldolase_II domain-containing protein. (809 aa)
	T265_03214	Uncharacterized protein. (586 aa)
	T265_00613	Uncharacterized protein. (193 aa)
	T265_08421	Uncharacterized protein. (997 aa)
	T265_14270	Diacylglycerol kinase. (887 aa)
	T265_07174	Uncharacterized protein. (483 aa)
	T265_05648	Uncharacterized protein. (788 aa)
	T265_03670	Uncharacterized protein. (608 aa)
	T265_00575	BTB domain-containing protein; Belongs to the potassium channel family. (1034 aa)
	T265_00386	Uncharacterized protein. (560 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00613	T265_03670	A0A075A5C3	A0A075AHE8	Uncharacterized protein.	Uncharacterized protein.	0.591
T265_00613	T265_05777	A0A075A5C3	A0A074ZMT6	Uncharacterized protein.	Uncharacterized protein.	0.765
T265_00613	T265_06179	A0A075A5C3	A0A074ZH48	Uncharacterized protein.	Uncharacterized protein.	0.591
T265_00613	T265_15024	A0A075A5C3	A0A074Z837	Uncharacterized protein.	Uncharacterized protein.	0.765
T265_00613	T265_15900	A0A075A5C3	A0A074ZU09	Uncharacterized protein.	PDZ domain-containing protein.	0.591
T265_01519	T265_13894	A0A074ZYC7	A0A074ZMG4	Diacylglycerol kinase.	Diacylglycerol kinase.	0.908
T265_01519	T265_14270	A0A074ZYC7	A0A075ABV9	Diacylglycerol kinase.	Diacylglycerol kinase.	0.919
T265_03214	T265_05648	A0A075A464	A0A075AF04	Uncharacterized protein.	Uncharacterized protein.	0.554
T265_03670	T265_00613	A0A075AHE8	A0A075A5C3	Uncharacterized protein.	Uncharacterized protein.	0.591
T265_03670	T265_04392	A0A075AHE8	A0A074ZZW5	Uncharacterized protein.	Uncharacterized protein.	0.411
T265_03670	T265_04393	A0A075AHE8	A0A074ZP09	Uncharacterized protein.	Uncharacterized protein.	0.411
T265_03670	T265_05777	A0A075AHE8	A0A074ZMT6	Uncharacterized protein.	Uncharacterized protein.	0.532
T265_03670	T265_08421	A0A075AHE8	A0A075A8H0	Uncharacterized protein.	Uncharacterized protein.	0.803
T265_03670	T265_08425	A0A075AHE8	A0A074Z9I4	Uncharacterized protein.	Uncharacterized protein.	0.411
T265_03670	T265_14323	A0A075AHE8	A0A074ZC53	Uncharacterized protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.411
T265_03670	T265_14723	A0A075AHE8	A0A074ZI80	Uncharacterized protein.	Uncharacterized protein.	0.625
T265_03670	T265_14724	A0A075AHE8	A0A074Z757	Uncharacterized protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.625
T265_03670	T265_14757	A0A075AHE8	A0A074Z6T3	Uncharacterized protein.	Uncharacterized protein.	0.541
T265_03670	T265_15024	A0A075AHE8	A0A074Z837	Uncharacterized protein.	Uncharacterized protein.	0.532
T265_03670	T265_15691	A0A075AHE8	A0A074ZV04	Uncharacterized protein.	Uncharacterized protein.	0.411