22 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_14407	Uncharacterized protein. (1114 aa)
	T265_10021	RBR-type E3 ubiquitin transferase. (530 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_07915	Uncharacterized protein. (1195 aa)
	T265_14531	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (336 aa)
	T265_08612	PDZ domain-containing protein. (376 aa)
	T265_11222	RBR-type E3 ubiquitin transferase. (511 aa)
	T265_15500	Uncharacterized protein. (702 aa)
	T265_11843	RING-type domain-containing protein. (788 aa)
	T265_12077	Protein kinase domain-containing protein. (400 aa)
	T265_00173	Uncharacterized protein. (981 aa)
	T265_01339	UBX domain-containing protein. (562 aa)
	T265_08339	Reverse transcriptase domain-containing protein. (1674 aa)
	T265_01847	Uncharacterized protein. (647 aa)
	T265_01254	Suppressor of fused protein. (977 aa)
	T265_01440	RBR-type E3 ubiquitin transferase. (369 aa)
	T265_01606	RBR-type E3 ubiquitin transferase. (769 aa)
	T265_13131	Ras-GAP domain-containing protein. (330 aa)
	T265_05234	Protein kinase domain-containing protein. (637 aa)
	T265_06111	RBR-type E3 ubiquitin transferase. (447 aa)
	T265_07694	ANK_REP_REGION domain-containing protein. (239 aa)
	T265_09410	WD_REPEATS_REGION domain-containing protein. (678 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01254	T265_05234	A0A075A3E2	A0A074ZWU6	Suppressor of fused protein.	Protein kinase domain-containing protein.	0.652
T265_01254	T265_09410	A0A075A3E2	A0A074ZH00	Suppressor of fused protein.	WD_REPEATS_REGION domain-containing protein.	0.428
T265_01254	T265_14531	A0A075A3E2	A0A074Z9Z6	Suppressor of fused protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.652
T265_01339	T265_08339	A0A075AJ27	A0A075A8Q0	UBX domain-containing protein.	Reverse transcriptase domain-containing protein.	0.924
T265_01339	T265_11843	A0A075AJ27	A0A074YX27	UBX domain-containing protein.	RING-type domain-containing protein.	0.537
T265_01440	T265_06111	A0A074ZYM8	A0A074ZTI7	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.612
T265_01440	T265_10021	A0A074ZYM8	A0A074ZER2	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.699
T265_01606	T265_10021	A0A074ZY52	A0A074ZER2	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.692
T265_05234	T265_01254	A0A074ZWU6	A0A075A3E2	Protein kinase domain-containing protein.	Suppressor of fused protein.	0.652
T265_05234	T265_07915	A0A074ZWU6	A0A074ZAR7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.856
T265_05234	T265_12077	A0A074ZWU6	A0A074YW15	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.569
T265_05234	T265_14407	A0A074ZWU6	A0A074ZFV4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.856
T265_06111	T265_01440	A0A074ZTI7	A0A074ZYM8	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.612
T265_07694	T265_07915	A0A074ZMZ3	A0A074ZAR7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.406
T265_07694	T265_14407	A0A074ZMZ3	A0A074ZFV4	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.406
T265_07915	T265_05234	A0A074ZAR7	A0A074ZWU6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.856
T265_07915	T265_07694	A0A074ZAR7	A0A074ZMZ3	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.406
T265_07915	T265_12077	A0A074ZAR7	A0A074YW15	Uncharacterized protein.	Protein kinase domain-containing protein.	0.961
T265_07915	T265_14407	A0A074ZAR7	A0A074ZFV4	Uncharacterized protein.	Uncharacterized protein.	0.900
T265_07915	T265_14531	A0A074ZAR7	A0A074Z9Z6	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.856