47 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16306	Parvo_NS1 domain-containing protein. (128 aa)
	T265_16236	Uncharacterized protein. (178 aa)
	T265_12241	Uncharacterized protein. (414 aa)
	T265_16364	Uncharacterized protein. (69 aa)
	T265_16164	Parvo_NS1 domain-containing protein. (72 aa)
	T265_10335	UBX domain-containing protein. (429 aa)
	T265_12329	Uncharacterized protein. (187 aa)
	T265_16177	Uncharacterized protein. (168 aa)
	T265_12325	Uncharacterized protein. (158 aa)
	T265_16044	SF3 helicase domain-containing protein. (140 aa)
	T265_10470	B30.2/SPRY domain-containing protein. (734 aa)
	T265_14763	Uncharacterized protein. (419 aa)
	T265_09562	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (290 aa)
	T265_08507	ANK_REP_REGION domain-containing protein. (667 aa)
	T265_10226	Uncharacterized protein. (1040 aa)
	T265_10097	DUF1308 domain-containing protein. (563 aa)
	T265_09503	AAA domain-containing protein; Belongs to the AAA ATPase family. (398 aa)
	T265_06227	Mic1 domain-containing protein. (734 aa)
	T265_09210	Uncharacterized protein. (325 aa)
	T265_06068	Uncharacterized protein. (475 aa)
	T265_13754	Uncharacterized protein. (167 aa)
	T265_13708	Aa_trans domain-containing protein. (620 aa)
	T265_05333	Ras family protein. (227 aa)
	T265_13554	Uncharacterized protein. (100 aa)
	T265_07410	GRANULINS domain-containing protein. (162 aa)
	T265_03743	Uncharacterized protein. (281 aa)
	T265_16267	Uncharacterized protein. (111 aa)
	T265_06273	Reverse transcriptase domain-containing protein. (2795 aa)
	T265_13025	Uncharacterized protein. (1046 aa)
	T265_11868	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (312 aa)
	T265_01107	Uncharacterized protein. (136 aa)
	T265_02224	Uncharacterized protein. (557 aa)
	T265_03756	Uncharacterized protein. (282 aa)
	T265_10096	Uncharacterized protein. (846 aa)
	T265_09502	AAA domain-containing protein. (274 aa)
	T265_08636	Uncharacterized protein. (2062 aa)
	T265_01539	Protein YIPF. (297 aa)
	T265_07650	VPS37 C-terminal domain-containing protein. (91 aa)
	T265_00872	Uncharacterized protein. (148 aa)
	T265_13996	ABC transmembrane type-1 domain-containing protein. (480 aa)
	T265_05450	Uncharacterized protein. (571 aa)
	T265_05358	Uncharacterized protein. (1099 aa)
	T265_04975	Uncharacterized protein. (339 aa)
	T265_03683	Uncharacterized protein. (425 aa)
	T265_01109	Uncharacterized protein. (181 aa)
	T265_00715	Uncharacterized protein. (371 aa)
	T265_00034	Uncharacterized protein. (417 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01107	T265_01109	A0A074ZZD2	A0A075AJ58	Uncharacterized protein.	Uncharacterized protein.	0.929
T265_01107	T265_07650	A0A074ZZD2	A0A075AB05	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.493
T265_01107	T265_09502	A0A074ZZD2	A0A075A4P2	Uncharacterized protein.	AAA domain-containing protein.	0.973
T265_01107	T265_09503	A0A074ZZD2	A0A074ZGK8	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.973
T265_01109	T265_01107	A0A075AJ58	A0A074ZZD2	Uncharacterized protein.	Uncharacterized protein.	0.929
T265_01109	T265_07650	A0A075AJ58	A0A075AB05	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.493
T265_01109	T265_09502	A0A075AJ58	A0A075A4P2	Uncharacterized protein.	AAA domain-containing protein.	0.973
T265_01109	T265_09503	A0A075AJ58	A0A074ZGK8	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.973
T265_03756	T265_04975	A0A075A2B6	A0A075AFW9	Uncharacterized protein.	Uncharacterized protein.	0.998
T265_03756	T265_05450	A0A075A2B6	A0A075AF91	Uncharacterized protein.	Uncharacterized protein.	0.998
T265_03756	T265_13708	A0A075A2B6	A0A074ZKG5	Uncharacterized protein.	Aa_trans domain-containing protein.	0.992
T265_04975	T265_03756	A0A075AFW9	A0A075A2B6	Uncharacterized protein.	Uncharacterized protein.	0.998
T265_04975	T265_05450	A0A075AFW9	A0A075AF91	Uncharacterized protein.	Uncharacterized protein.	0.999
T265_04975	T265_13708	A0A075AFW9	A0A074ZKG5	Uncharacterized protein.	Aa_trans domain-containing protein.	0.995
T265_05450	T265_03756	A0A075AF91	A0A075A2B6	Uncharacterized protein.	Uncharacterized protein.	0.998
T265_05450	T265_04975	A0A075AF91	A0A075AFW9	Uncharacterized protein.	Uncharacterized protein.	0.999
T265_05450	T265_13708	A0A075AF91	A0A074ZKG5	Uncharacterized protein.	Aa_trans domain-containing protein.	0.996
T265_06068	T265_13996	A0A074ZIA6	A0A075AE29	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.910
T265_06227	T265_10470	A0A074ZH96	A0A074Z6F6	Mic1 domain-containing protein.	B30.2/SPRY domain-containing protein.	0.937
T265_07650	T265_01107	A0A075AB05	A0A074ZZD2	VPS37 C-terminal domain-containing protein.	Uncharacterized protein.	0.493