97 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_01933	Uncharacterized protein. (255 aa)
	T265_00344	Integrase catalytic domain-containing protein. (382 aa)
	T265_00715	Uncharacterized protein. (371 aa)
	T265_00868	Uncharacterized protein. (157 aa)
	T265_01121	Secretory carrier-associated membrane protein. (347 aa)
	T265_04228	Uncharacterized protein. (169 aa)
	T265_04349	Uncharacterized protein. (156 aa)
	T265_04431	FPL domain-containing protein. (1233 aa)
	T265_04975	Uncharacterized protein. (339 aa)
	T265_04985	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (560 aa)
	T265_05225	Uncharacterized protein. (192 aa)
	T265_05355	Uncharacterized protein. (694 aa)
	T265_05450	Uncharacterized protein. (571 aa)
	T265_13996	ABC transmembrane type-1 domain-containing protein. (480 aa)
	T265_06362	Uncharacterized protein. (106 aa)
	T265_00262	Uncharacterized protein. (177 aa)
	T265_07225	Uncharacterized protein. (241 aa)
	T265_14332	Uncharacterized protein. (151 aa)
	T265_07650	VPS37 C-terminal domain-containing protein. (91 aa)
	T265_01236	Uncharacterized protein. (192 aa)
	T265_01539	Protein YIPF. (297 aa)
	T265_01672	Uncharacterized protein. (215 aa)
	T265_14528	Uncharacterized protein. (105 aa)
	T265_08636	Uncharacterized protein. (2062 aa)
	T265_08900	Uncharacterized protein. (433 aa)
	T265_12475	PX domain-containing protein. (403 aa)
	T265_08963	J domain-containing protein. (1106 aa)
	T265_09087	Uncharacterized protein. (216 aa)
	T265_09151	Uncharacterized protein. (331 aa)
	T265_00936	Uncharacterized protein. (303 aa)
	T265_09502	AAA domain-containing protein. (274 aa)
	T265_00943	Uncharacterized protein. (128 aa)
	T265_10058	Uncharacterized protein. (533 aa)
	T265_00212	Uncharacterized protein. (445 aa)
	T265_03756	Uncharacterized protein. (282 aa)
	T265_15072	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (546 aa)
	T265_12666	Uncharacterized protein. (332 aa)
	T265_10421	Secretory carrier-associated membrane protein. (263 aa)
	T265_02224	Uncharacterized protein. (557 aa)
	T265_11021	Uncharacterized protein. (155 aa)
	T265_01681	Uncharacterized protein. (391 aa)
	T265_11150	Uncharacterized protein. (419 aa)
	T265_01698	GLUE N-terminal domain-containing protein. (608 aa)
	T265_02940	PH domain-containing protein. (597 aa)
	T265_02082	Uncharacterized protein. (1091 aa)
	T265_11868	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (312 aa)
	T265_02601	RT_RNaseH domain-containing protein. (300 aa)
	T265_13025	Uncharacterized protein. (1046 aa)
	T265_03000	Uncharacterized protein. (210 aa)
	T265_13070	Uncharacterized protein. (191 aa)
	T265_02794	CRAL-TRIO domain-containing protein. (317 aa)
	T265_03110	SB domain-containing protein. (578 aa)
	T265_02838	CRAL-TRIO domain-containing protein. (332 aa)
	T265_13987	Uncharacterized protein. (399 aa)
	T265_04939	Ion_trans domain-containing protein. (778 aa)
	T265_03743	Uncharacterized protein. (281 aa)
	T265_07397	Uncharacterized protein. (250 aa)
	T265_13687	Uncharacterized protein. (294 aa)
	T265_13715	Uncharacterized protein. (190 aa)
	T265_13708	Aa_trans domain-containing protein. (620 aa)
	T265_05337	Uncharacterized protein. (103 aa)
	T265_08964	Uncharacterized protein. (1398 aa)
	T265_06068	Uncharacterized protein. (475 aa)
	T265_14731	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (734 aa)
	T265_09210	Uncharacterized protein. (325 aa)
	T265_09321	Uncharacterized protein. (83 aa)
	T265_14831	Uncharacterized protein. (177 aa)
	T265_09503	AAA domain-containing protein; Belongs to the AAA ATPase family. (398 aa)
	T265_06730	Uncharacterized protein. (123 aa)
	T265_09946	Uncharacterized protein. (244 aa)
	T265_10097	DUF1308 domain-containing protein. (563 aa)
	T265_10226	Uncharacterized protein. (1040 aa)
	T265_10821	Ras family protein. (262 aa)
	T265_09155	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (357 aa)
	T265_14508	Uncharacterized protein. (125 aa)
	T265_09562	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (290 aa)
	T265_09577	Uncharacterized protein. (240 aa)
	T265_11395	Uncharacterized protein. (345 aa)
	T265_08965	Uncharacterized protein. (331 aa)
	T265_09082	Uncharacterized protein. (1765 aa)
	T265_09383	Uncharacterized protein. (268 aa)
	T265_10615	Uncharacterized protein. (227 aa)
	T265_09640	Uncharacterized protein. (99 aa)
	T265_09618	Uncharacterized protein. (413 aa)
	T265_09639	Uncharacterized protein. (287 aa)
	T265_09685	Uncharacterized protein; Belongs to the VPS28 family. (343 aa)
	T265_09846	Uncharacterized protein. (424 aa)
	T265_16323	Uncharacterized protein. (104 aa)
	T265_10127	Uncharacterized protein. (363 aa)
	T265_10335	UBX domain-containing protein. (429 aa)
	T265_15239	VPS10 domain-containing protein. (685 aa)
	T265_10769	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (636 aa)
	T265_10966	Uncharacterized protein. (196 aa)
	T265_15311	Uncharacterized protein. (818 aa)
	T265_11288	Rho-GAP domain-containing protein. (1174 aa)
	T265_16364	Uncharacterized protein. (69 aa)
	T265_15509	SAC domain-containing protein. (1492 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00212	T265_02940	A0A075A2S6	A0A074ZXP4	Uncharacterized protein.	PH domain-containing protein.	0.585
T265_00212	T265_03000	A0A075A2S6	A0A074ZU96	Uncharacterized protein.	Uncharacterized protein.	0.425
T265_00212	T265_10821	A0A075A2S6	A0A074ZBX2	Uncharacterized protein.	Ras family protein.	0.425
T265_00212	T265_12666	A0A075A2S6	A0A075A1K0	Uncharacterized protein.	Uncharacterized protein.	0.456
T265_00262	T265_00344	A0A075ADA7	A0A075AJS7	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.460
T265_00262	T265_01698	A0A075ADA7	A0A074ZXW0	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.580
T265_00262	T265_03110	A0A075ADA7	A0A074ZTQ1	Uncharacterized protein.	SB domain-containing protein.	0.685
T265_00262	T265_07650	A0A075ADA7	A0A075AB05	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.605
T265_00262	T265_09151	A0A075ADA7	A0A075A5X7	Uncharacterized protein.	Uncharacterized protein.	0.499
T265_00262	T265_10127	A0A075ADA7	A0A074Z3G5	Uncharacterized protein.	Uncharacterized protein.	0.624
T265_00262	T265_10615	A0A075ADA7	A0A074Z5Y2	Uncharacterized protein.	Uncharacterized protein.	0.475
T265_00344	T265_00262	A0A075AJS7	A0A075ADA7	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.460
T265_00344	T265_00943	A0A075AJS7	A0A075A426	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.460
T265_00344	T265_01236	A0A075AJS7	A0A075AAG0	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.460
T265_00344	T265_01672	A0A075AJS7	A0A075A946	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.558
T265_00344	T265_01681	A0A075AJS7	A0A074ZYW0	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.460
T265_00344	T265_01698	A0A075AJS7	A0A074ZXW0	Integrase catalytic domain-containing protein.	GLUE N-terminal domain-containing protein.	0.920
T265_00344	T265_01933	A0A075AJS7	A0A074ZXL3	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.460
T265_00344	T265_02601	A0A075AJS7	A0A074ZV66	Integrase catalytic domain-containing protein.	RT_RNaseH domain-containing protein.	0.449
T265_00344	T265_03110	A0A075AJS7	A0A074ZTQ1	Integrase catalytic domain-containing protein.	SB domain-containing protein.	0.893