(31 nodes) Chromosomal region network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_13112	Deacetylase sirtuin-type domain-containing protein. (1694 aa)
	T265_15623	Telo_bind domain-containing protein. (725 aa)
	T265_15873	Telo_bind domain-containing protein. (110 aa)
	T265_14970	Hat1_N domain-containing protein. (438 aa)
	T265_10609	G-patch domain-containing protein. (317 aa)
	T265_07815	Guanylate cyclase. (1252 aa)
	T265_07721	Uncharacterized protein. (203 aa)
	T265_07640	Uncharacterized protein. (202 aa)
	T265_07722	Protein kinase domain-containing protein. (793 aa)
	T265_07016	DRMBL domain-containing protein. (471 aa)
	T265_05422	Uncharacterized protein. (2193 aa)
	T265_14406	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (575 aa)
	T265_04448	Uncharacterized protein. (242 aa)
	T265_04246	Uncharacterized protein. (205 aa)
	T265_16270	Uncharacterized protein. (59 aa)
	T265_01865	Uncharacterized protein. (487 aa)
	T265_03022	Guanylate cyclase. (1336 aa)
	T265_13075	Uncharacterized protein. (1021 aa)
	T265_02648	Uncharacterized protein. (380 aa)
	T265_15308	Uncharacterized protein. (695 aa)
	T265_10597	Uncharacterized protein. (544 aa)
	T265_12667	Uncharacterized protein. (219 aa)
	T265_00612	Uncharacterized protein. (1216 aa)
	T265_13276	Uncharacterized protein. (1630 aa)
	T265_00709	Uncharacterized protein. (177 aa)
	T265_00335	Uncharacterized protein. (2194 aa)
	T265_00908	Guanylate cyclase. (722 aa)
	T265_06122	NIBRIN_BRCT_II domain-containing protein. (720 aa)
	T265_06086	DRMBL domain-containing protein. (283 aa)
	T265_13777	Uncharacterized protein. (530 aa)
	T265_13602	Rod_C domain-containing protein. (2308 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00335	T265_13777	A0A075A6B3	A0A075AF93	Uncharacterized protein.	Uncharacterized protein.	0.523
T265_00335	T265_15623	A0A075A6B3	A0A074YWQ5	Uncharacterized protein.	Telo_bind domain-containing protein.	0.409
T265_00335	T265_15873	A0A075A6B3	A0A074YZS7	Uncharacterized protein.	Telo_bind domain-containing protein.	0.409
T265_00612	T265_06122	A0A075A2A2	A0A075AEG4	Uncharacterized protein.	NIBRIN_BRCT_II domain-containing protein.	0.671
T265_00612	T265_15623	A0A075A2A2	A0A074YWQ5	Uncharacterized protein.	Telo_bind domain-containing protein.	0.522
T265_00612	T265_15873	A0A075A2A2	A0A074YZS7	Uncharacterized protein.	Telo_bind domain-containing protein.	0.522
T265_01865	T265_07721	A0A074ZWU2	A0A074ZBM7	Uncharacterized protein.	Uncharacterized protein.	0.707
T265_01865	T265_07722	A0A074ZWU2	A0A074ZGB2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.707
T265_01865	T265_13602	A0A074ZWU2	A0A075AG27	Uncharacterized protein.	Rod_C domain-containing protein.	0.435
T265_04448	T265_07721	A0A074ZNS9	A0A074ZBM7	Uncharacterized protein.	Uncharacterized protein.	0.673
T265_04448	T265_07722	A0A074ZNS9	A0A074ZGB2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.673
T265_06086	T265_06122	A0A075AEH6	A0A075AEG4	DRMBL domain-containing protein.	NIBRIN_BRCT_II domain-containing protein.	0.636
T265_06122	T265_00612	A0A075AEG4	A0A075A2A2	NIBRIN_BRCT_II domain-containing protein.	Uncharacterized protein.	0.671
T265_06122	T265_06086	A0A075AEG4	A0A075AEH6	NIBRIN_BRCT_II domain-containing protein.	DRMBL domain-containing protein.	0.636
T265_06122	T265_07016	A0A075AEG4	A0A074ZID3	NIBRIN_BRCT_II domain-containing protein.	DRMBL domain-containing protein.	0.636
T265_06122	T265_15623	A0A075AEG4	A0A074YWQ5	NIBRIN_BRCT_II domain-containing protein.	Telo_bind domain-containing protein.	0.414
T265_06122	T265_15873	A0A075AEG4	A0A074YZS7	NIBRIN_BRCT_II domain-containing protein.	Telo_bind domain-containing protein.	0.414
T265_07016	T265_06122	A0A074ZID3	A0A075AEG4	DRMBL domain-containing protein.	NIBRIN_BRCT_II domain-containing protein.	0.636
T265_07721	T265_01865	A0A074ZBM7	A0A074ZWU2	Uncharacterized protein.	Uncharacterized protein.	0.707
T265_07721	T265_04448	A0A074ZBM7	A0A074ZNS9	Uncharacterized protein.	Uncharacterized protein.	0.673