(70 nodes) Homeobox domain network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15947	Homeobox domain-containing protein. (70 aa)
	T265_11894	Homeobox domain-containing protein. (244 aa)
	T265_11607	Homeobox domain-containing protein. (379 aa)
	T265_10782	Homeobox domain-containing protein. (338 aa)
	T265_11578	Uncharacterized protein. (923 aa)
	T265_10172	Homeobox domain-containing protein. (304 aa)
	T265_10123	Uncharacterized protein. (559 aa)
	T265_10106	Homeobox domain-containing protein. (315 aa)
	T265_10781	Homeobox domain-containing protein. (286 aa)
	T265_10107	Homeobox domain-containing protein. (734 aa)
	T265_08787	Homeobox domain-containing protein. (109 aa)
	T265_09780	Uncharacterized protein. (857 aa)
	T265_09221	Uncharacterized protein. (1054 aa)
	T265_14387	Homeobox domain-containing protein. (136 aa)
	T265_08085	Homeobox domain-containing protein. (1057 aa)
	T265_14069	Uncharacterized protein. (651 aa)
	T265_09553	Homeobox domain-containing protein. (804 aa)
	T265_06339	Homeobox domain-containing protein. (758 aa)
	T265_14002	Homeobox domain-containing protein. (474 aa)
	T265_08121	Homeobox domain-containing protein. (699 aa)
	T265_04983	Homeobox domain-containing protein. (454 aa)
	T265_04507	Homeobox domain-containing protein. (872 aa)
	T265_13466	Uncharacterized protein. (1378 aa)
	T265_05154	POU domain protein. (627 aa)
	T265_13340	Uncharacterized protein. (461 aa)
	T265_06818	Homeobox domain-containing protein. (710 aa)
	T265_13587	Homeobox domain-containing protein. (321 aa)
	T265_06400	Homeobox domain-containing protein. (346 aa)
	T265_04438	POU domain protein. (1332 aa)
	T265_06348	Homeobox domain-containing protein. (139 aa)
	T265_16010	Homeobox domain-containing protein. (100 aa)
	T265_02852	Homeobox domain-containing protein. (500 aa)
	T265_03060	Uncharacterized protein. (580 aa)
	T265_11375	Homeobox domain-containing protein. (536 aa)
	T265_01203	Homeobox domain-containing protein. (1235 aa)
	T265_01609	Homeobox domain-containing protein. (904 aa)
	T265_04509	Homeobox domain-containing protein. (245 aa)
	T265_01041	Homeobox domain-containing protein. (759 aa)
	T265_01068	Uncharacterized protein. (341 aa)
	T265_00824	POU domain protein. (836 aa)
	T265_00694	Homeobox domain-containing protein. (443 aa)
	T265_13435	Homeobox domain-containing protein. (463 aa)
	T265_04102	Homeobox domain-containing protein. (309 aa)
	T265_00632	Homeobox domain-containing protein. (519 aa)
	T265_00637	Homeobox domain-containing protein. (408 aa)
	T265_14971	Uncharacterized protein. (512 aa)
	T265_14910	Homeobox domain-containing protein. (536 aa)
	T265_13165	Homeobox domain-containing protein. (252 aa)
	T265_00751	One cut domain family member. (1110 aa)
	T265_00509	Homeobox domain-containing protein. (651 aa)
	T265_02665	Homeobox domain-containing protein. (482 aa)
	T265_08851	Homeobox domain-containing protein. (859 aa)
	T265_02183	Homeobox domain-containing protein. (307 aa)
	T265_08574	Homeobox domain-containing protein. (832 aa)
	T265_08234	Homeobox domain-containing protein. (745 aa)
	T265_00770	Homeobox domain-containing protein. (816 aa)
	T265_12628	Homeobox domain-containing protein. (647 aa)
	T265_00495	Homeobox domain-containing protein. (985 aa)
	T265_12441	Homeobox domain-containing protein. (489 aa)
	T265_00071	DNA-binding protein SATB. (1410 aa)
	T265_00125	Homeobox domain-containing protein. (429 aa)
	T265_00157	Uncharacterized protein. (914 aa)
	T265_13413	Homeobox domain-containing protein. (745 aa)
	T265_03777	Uncharacterized protein. (557 aa)
	T265_03375	Homeobox domain-containing protein. (327 aa)
	T265_01789	Homeobox domain-containing protein. (591 aa)
	T265_01527	Uncharacterized protein. (693 aa)
	T265_01147	One cut domain family member. (767 aa)
	T265_00628	Homeobox domain-containing protein. (952 aa)
	T265_12483	Homeobox domain-containing protein. (1601 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00071	T265_00157	A0A075ADH6	A0A075ADM0	DNA-binding protein SATB.	Uncharacterized protein.	0.595
T265_00071	T265_02665	A0A075ADH6	A0A075A5S6	DNA-binding protein SATB.	Homeobox domain-containing protein.	0.504
T265_00071	T265_09221	A0A075ADH6	A0A074ZB16	DNA-binding protein SATB.	Uncharacterized protein.	0.595
T265_00071	T265_10172	A0A075ADH6	A0A074Z388	DNA-binding protein SATB.	Homeobox domain-containing protein.	0.448
T265_00071	T265_11578	A0A075ADH6	A0A074Z2K2	DNA-binding protein SATB.	Uncharacterized protein.	0.538
T265_00071	T265_14971	A0A075ADH6	A0A075A3J1	DNA-binding protein SATB.	Uncharacterized protein.	0.595
T265_00125	T265_00495	A0A075ADK3	A0A075ACI0	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_00632	A0A075ADK3	A0A075A1A8	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_00637	A0A075ADK3	A0A075A2C7	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_01203	A0A075ADK3	A0A074ZZ53	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.458
T265_00125	T265_02183	A0A075ADK3	A0A075A7R1	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.422
T265_00125	T265_03375	A0A075ADK3	A0A075AHL8	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_06339	A0A075ADK3	A0A074ZGT4	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_06818	A0A075ADK3	A0A074ZR21	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.458
T265_00125	T265_08121	A0A075ADK3	A0A074ZLA9	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_08787	A0A075ADK3	A0A074Z869	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_09553	A0A075ADK3	A0A074ZGF2	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.458
T265_00125	T265_10106	A0A075ADK3	A0A074Z3I6	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.601
T265_00125	T265_10107	A0A075ADK3	A0A074Z7Q8	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.453
T265_00125	T265_12628	A0A075ADK3	A0A075AC46	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.458