(6 nodes) Sema domain network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_14941	Sema domain-containing protein. (324 aa)
	T265_01892	Sema domain-containing protein. (1113 aa)
	T265_06721	Sema domain-containing protein. (297 aa)
	T265_03559	Sema domain-containing protein. (1306 aa)
	T265_13935	Sema domain-containing protein. (1327 aa)
	T265_07647	Sema domain-containing protein. (2788 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01892	T265_07647	A0A074ZWW8	A0A074ZBT8	Sema domain-containing protein.	Sema domain-containing protein.	0.716
T265_03559	T265_07647	A0A074ZR19	A0A074ZBT8	Sema domain-containing protein.	Sema domain-containing protein.	0.924
T265_06721	T265_07647	A0A074ZRE0	A0A074ZBT8	Sema domain-containing protein.	Sema domain-containing protein.	0.716
T265_07647	T265_01892	A0A074ZBT8	A0A074ZWW8	Sema domain-containing protein.	Sema domain-containing protein.	0.716
T265_07647	T265_03559	A0A074ZBT8	A0A074ZR19	Sema domain-containing protein.	Sema domain-containing protein.	0.924
T265_07647	T265_06721	A0A074ZBT8	A0A074ZRE0	Sema domain-containing protein.	Sema domain-containing protein.	0.716
T265_07647	T265_13935	A0A074ZBT8	A0A074ZIE3	Sema domain-containing protein.	Sema domain-containing protein.	0.924
T265_07647	T265_14941	A0A074ZBT8	A0A074ZFV2	Sema domain-containing protein.	Sema domain-containing protein.	0.716
T265_13935	T265_07647	A0A074ZIE3	A0A074ZBT8	Sema domain-containing protein.	Sema domain-containing protein.	0.924
T265_14941	T265_07647	A0A074ZFV2	A0A074ZBT8	Sema domain-containing protein.	Sema domain-containing protein.	0.716