120 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_07777	Uncharacterized protein. (155 aa)
	T265_12405	EF-hand domain-containing protein. (63 aa)
	T265_16296	EF-hand domain-containing protein. (45 aa)
	T265_15796	EF-hand domain-containing protein. (88 aa)
	T265_12080	Uncharacterized protein. (250 aa)
	T265_15643	Uncharacterized protein. (745 aa)
	T265_11703	Uncharacterized protein. (212 aa)
	T265_11349	Uncharacterized protein. (223 aa)
	T265_11055	Uncharacterized protein. (188 aa)
	T265_10872	Uncharacterized protein. (102 aa)
	T265_15273	Uncharacterized protein. (78 aa)
	T265_10874	Uncharacterized protein. (209 aa)
	T265_10856	Uncharacterized protein. (573 aa)
	T265_11702	Uncharacterized protein. (334 aa)
	T265_09940	EF hand. (144 aa)
	T265_09816	Uncharacterized protein. (344 aa)
	T265_09764	Uncharacterized protein. (1099 aa)
	T265_10873	EF-hand domain-containing protein. (67 aa)
	T265_09456	Uncharacterized protein. (191 aa)
	T265_15847	EF-hand domain-containing protein. (120 aa)
	T265_14804	Uncharacterized protein. (77 aa)
	T265_09309	Uncharacterized protein. (119 aa)
	T265_09089	EF-hand domain-containing protein. (186 aa)
	T265_09006	Uncharacterized protein. (69 aa)
	T265_08986	EF hand. (194 aa)
	CaBP-1	Calcium binding protein containing EF hand domains. (195 aa)
	T265_14591	Uncharacterized protein. (184 aa)
	T265_08511	Uncharacterized protein. (172 aa)
	T265_14575	Uncharacterized protein. (4010 aa)
	T265_08043	Uncharacterized protein. (175 aa)
	T265_11151	Uncharacterized protein. (306 aa)
	T265_08097	Uncharacterized protein. (1378 aa)
	T265_10871	Uncharacterized protein. (164 aa)
	T265_10876	Uncharacterized protein. (230 aa)
	T265_07761	Uncharacterized protein. (238 aa)
	T265_10763	EF-hand domain-containing protein. (206 aa)
	T265_08749	Uncharacterized protein. (179 aa)
	T265_14277	Uncharacterized protein; Belongs to the calmodulin family. (305 aa)
	T265_07350	Uncharacterized protein. (171 aa)
	T265_14592	EF-hand domain-containing protein. (152 aa)
	T265_06881	Uncharacterized protein. (70 aa)
	T265_06886	EF hand. (149 aa)
	T265_14130	EF hand. (163 aa)
	T265_07952	Uncharacterized protein. (888 aa)
	T265_06539	Uncharacterized protein. (627 aa)
	T265_06530	Uncharacterized protein. (137 aa)
	T265_09307	Uncharacterized protein. (116 aa)
	T265_09233	EF hand. (208 aa)
	T265_14214	Uncharacterized protein; Belongs to the peptidase C2 family. (756 aa)
	T265_14725	EF-hand domain-containing protein. (79 aa)
	CaBP-2	Calcium binding protein containing EF hand domains. (184 aa)
	T265_14718	Uncharacterized protein. (431 aa)
	T265_13848	Uncharacterized protein. (516 aa)
	T265_06880	Uncharacterized protein. (74 aa)
	T265_06884	Uncharacterized protein. (148 aa)
	T265_13874	Serine/threonine-protein phosphatase. (790 aa)
	T265_08631	Uncharacterized protein. (2967 aa)
	T265_05325	EF-hand domain-containing protein. (1565 aa)
	T265_06308	Uncharacterized protein. (231 aa)
	T265_05184	Uncharacterized protein. (293 aa)
	T265_04760	Uncharacterized protein. (333 aa)
	T265_04775	EF hand. (191 aa)
	T265_05949	Uncharacterized protein; Belongs to the peptidase C2 family. (863 aa)
	T265_07827	SAP domain protein. (882 aa)
	T265_13547	Uncharacterized protein; Belongs to the calmodulin family. (175 aa)
	T265_04609	Uncharacterized protein. (179 aa)
	T265_04591	Zinc finger, C2H2 type. (373 aa)
	T265_04467	Uncharacterized protein. (654 aa)
	T265_14162	Uncharacterized protein. (142 aa)
	T265_06615	Uncharacterized protein. (153 aa)
	T265_03323	Uncharacterized protein. (119 aa)
	T265_13534	Uncharacterized protein. (971 aa)
	T265_02935	Uncharacterized protein. (633 aa)
	T265_02869	Uncharacterized protein. (905 aa)
	T265_02890	Uncharacterized protein. (242 aa)
	T265_02867	Uncharacterized protein. (300 aa)
	T265_13288	Uncharacterized protein. (905 aa)
	T265_02148	Uncharacterized protein. (1018 aa)
	T265_11810	EF hand. (175 aa)
	T265_02176	Uncharacterized protein. (170 aa)
	T265_11754	Uncharacterized protein. (228 aa)
	T265_13704	Uncharacterized protein. (253 aa)
	T265_01951	EF-hand domain-containing protein. (929 aa)
	T265_04546	Uncharacterized protein. (301 aa)
	T265_10875	EF-hand domain-containing protein. (79 aa)
	T265_02029	Uncharacterized protein. (244 aa)
	T265_01787	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (991 aa)
	T265_15072	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (546 aa)
	T265_00314	Uncharacterized protein. (299 aa)
	T265_00212	Uncharacterized protein. (445 aa)
	T265_00542	Uncharacterized protein. (150 aa)
	T265_01271	EF-hand domain-containing protein. (1162 aa)
	T265_09488	Uncharacterized protein. (226 aa)
	T265_02866	Uncharacterized protein. (230 aa)
	T265_09310	Uncharacterized protein. (74 aa)
	T265_00492	Uncharacterized protein. (162 aa)
	T265_09254	Uncharacterized protein. (5727 aa)
	T265_13057	Uncharacterized protein. (1856 aa)
	T265_08985	Uncharacterized protein. (198 aa)
	T265_08714	Uncharacterized protein. (295 aa)
	T265_02149	Uncharacterized protein. (290 aa)
	T265_02027	Uncharacterized protein. (427 aa)
	T265_12848	Uncharacterized protein. (290 aa)
	T265_07946	Uncharacterized protein. (165 aa)
	T265_01082	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (602 aa)
	T265_07209	Uncharacterized protein. (615 aa)
	T265_06887	EF-hand domain-containing protein. (191 aa)
	T265_14126	Uncharacterized protein. (227 aa)
	T265_06487	Uncharacterized protein. (299 aa)
	T265_04985	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (560 aa)
	T265_05017	EF-hand domain-containing protein. (297 aa)
	T265_13608	Uncharacterized protein. (134 aa)
	T265_13416	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (735 aa)
	T265_03915	EF-hand domain-containing protein. (715 aa)
	T265_13247	Uncharacterized protein. (150 aa)
	T265_13055	Spectrin repeat-containing domain protein. (2421 aa)
	T265_12934	Uncharacterized protein. (152 aa)
	T265_00949	Uncharacterized protein. (706 aa)
	T265_12566	Uncharacterized protein. (258 aa)
	T265_00566	Uncharacterized protein. (382 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00212	T265_02029	A0A075A2S6	A0A075A0M9	Uncharacterized protein.	Uncharacterized protein.	0.414
T265_00212	T265_03915	A0A075A2S6	A0A075AH82	Uncharacterized protein.	EF-hand domain-containing protein.	0.414
T265_00212	T265_13057	A0A075A2S6	A0A075A624	Uncharacterized protein.	Uncharacterized protein.	0.425
T265_00314	T265_02869	A0A075A2B7	A0A074ZTG1	Uncharacterized protein.	Uncharacterized protein.	0.684
T265_00314	T265_04609	A0A075A2B7	A0A074ZN61	Uncharacterized protein.	Uncharacterized protein.	0.467
T265_00314	T265_07209	A0A075A2B7	A0A075AC94	Uncharacterized protein.	Uncharacterized protein.	0.618
T265_00314	T265_08714	A0A075A2B7	A0A075A7F5	Uncharacterized protein.	Uncharacterized protein.	0.801
T265_00314	T265_08749	A0A075A2B7	A0A074ZCK1	Uncharacterized protein.	Uncharacterized protein.	0.459
T265_00314	T265_11810	A0A075A2B7	A0A074ZW37	Uncharacterized protein.	EF hand.	0.801
T265_00314	T265_13247	A0A075A2B7	A0A075AHK5	Uncharacterized protein.	Uncharacterized protein.	0.462
T265_00492	T265_02176	A0A075A5L5	A0A074ZW75	Uncharacterized protein.	Uncharacterized protein.	0.421
T265_00492	T265_06884	A0A075A5L5	A0A074ZIX6	Uncharacterized protein.	Uncharacterized protein.	0.419
T265_00492	T265_12934	A0A075A5L5	A0A075AIH4	Uncharacterized protein.	Uncharacterized protein.	0.400
T265_00949	T265_13534	A0A075AJA5	A0A074ZS92	Uncharacterized protein.	Uncharacterized protein.	0.453
T265_01951	T265_13874	A0A074ZXN7	A0A074ZJ82	EF-hand domain-containing protein.	Serine/threonine-protein phosphatase.	0.473
T265_02029	T265_00212	A0A075A0M9	A0A075A2S6	Uncharacterized protein.	Uncharacterized protein.	0.414
T265_02176	T265_00492	A0A074ZW75	A0A075A5L5	Uncharacterized protein.	Uncharacterized protein.	0.421
T265_02866	T265_02869	A0A075A5E9	A0A074ZTG1	Uncharacterized protein.	Uncharacterized protein.	0.684
T265_02866	T265_07209	A0A075A5E9	A0A075AC94	Uncharacterized protein.	Uncharacterized protein.	0.618
T265_02866	T265_08714	A0A075A5E9	A0A075A7F5	Uncharacterized protein.	Uncharacterized protein.	0.836