(27 nodes) Short-chain dehydrogenase/reductase SDR network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12688	Uncharacterized protein. (399 aa)
	T265_04936	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	T265_15999	Uncharacterized protein. (106 aa)
	T265_15439	Oxidoreductase, short chain dehydrogenase/reductase family protein. (339 aa)
	T265_11039	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (329 aa)
	T265_11059	Uncharacterized protein. (358 aa)
	T265_16028	Uncharacterized protein. (99 aa)
	T265_09004	Uncharacterized protein. (260 aa)
	T265_11060	Uncharacterized protein. (331 aa)
	T265_07291	Uncharacterized protein. (335 aa)
	T265_10122	Uncharacterized protein. (177 aa)
	T265_14188	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (355 aa)
	T265_13907	Uncharacterized protein. (282 aa)
	T265_07506	Uncharacterized protein. (420 aa)
	T265_05841	Uncharacterized protein. (731 aa)
	T265_13634	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	T265_03816	Uncharacterized protein. (368 aa)
	T265_13980	Uncharacterized protein. (274 aa)
	T265_15993	Uncharacterized protein. (109 aa)
	T265_03838	Uncharacterized protein. (396 aa)
	T265_03704	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (498 aa)
	T265_09306	Uncharacterized protein. (217 aa)
	T265_09005	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	T265_06506	Uncharacterized protein. (328 aa)
	T265_04997	Uncharacterized protein. (324 aa)
	T265_01692	Uncharacterized protein. (368 aa)
	T265_01173	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (346 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01173	T265_04936	A0A075AJ74	A0A074ZLH3	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.422
T265_01173	T265_09005	A0A075AJ74	A0A075A6F1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.437
T265_01173	T265_12688	A0A075AJ74	A0A075AJB6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.509
T265_01173	T265_13634	A0A075AJ74	A0A074ZMA6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.421
T265_04936	T265_01173	A0A074ZLH3	A0A075AJ74	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.422
T265_04936	T265_09004	A0A074ZLH3	A0A074Z7E2	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.908
T265_04936	T265_09005	A0A074ZLH3	A0A075A6F1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.905
T265_04936	T265_09306	A0A074ZLH3	A0A075A5G1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.904
T265_04936	T265_12688	A0A074ZLH3	A0A075AJB6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.904
T265_04936	T265_13634	A0A074ZLH3	A0A074ZMA6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.900
T265_09004	T265_04936	A0A074Z7E2	A0A074ZLH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.908
T265_09004	T265_09005	A0A074Z7E2	A0A075A6F1	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.901
T265_09004	T265_09306	A0A074Z7E2	A0A075A5G1	Uncharacterized protein.	Uncharacterized protein.	0.910
T265_09004	T265_12688	A0A074Z7E2	A0A075AJB6	Uncharacterized protein.	Uncharacterized protein.	0.904
T265_09004	T265_13634	A0A074Z7E2	A0A074ZMA6	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.908
T265_09005	T265_01173	A0A075A6F1	A0A075AJ74	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.437
T265_09005	T265_04936	A0A075A6F1	A0A074ZLH3	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.905
T265_09005	T265_09004	A0A075A6F1	A0A074Z7E2	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.901
T265_09005	T265_09306	A0A075A6F1	A0A075A5G1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.900
T265_09005	T265_12688	A0A075A6F1	A0A075AJB6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.902