(5 nodes) Aromatic-L-amino-acid decarboxylase network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10505	Uncharacterized protein. (704 aa)
	T265_10507	Reverse transcriptase domain-containing protein. (262 aa)
	T265_03298	Uncharacterized protein. (530 aa)
	T265_00374	Uncharacterized protein. (236 aa)
	T265_00373	Uncharacterized protein. (175 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00373	T265_10505	A0A075AJT4	A0A074Z216	Uncharacterized protein.	Uncharacterized protein.	0.542
T265_00373	T265_10507	A0A075AJT4	A0A074Z272	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.541
T265_00374	T265_03298	A0A075AD02	A0A074ZS54	Uncharacterized protein.	Uncharacterized protein.	0.911
T265_00374	T265_10505	A0A075AD02	A0A074Z216	Uncharacterized protein.	Uncharacterized protein.	0.953
T265_00374	T265_10507	A0A075AD02	A0A074Z272	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.920
T265_03298	T265_00374	A0A074ZS54	A0A075AD02	Uncharacterized protein.	Uncharacterized protein.	0.911
T265_03298	T265_10505	A0A074ZS54	A0A074Z216	Uncharacterized protein.	Uncharacterized protein.	0.921
T265_03298	T265_10507	A0A074ZS54	A0A074Z272	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.918
T265_10505	T265_00373	A0A074Z216	A0A075AJT4	Uncharacterized protein.	Uncharacterized protein.	0.542
T265_10505	T265_00374	A0A074Z216	A0A075AD02	Uncharacterized protein.	Uncharacterized protein.	0.953
T265_10505	T265_03298	A0A074Z216	A0A074ZS54	Uncharacterized protein.	Uncharacterized protein.	0.921
T265_10505	T265_10507	A0A074Z216	A0A074Z272	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.957
T265_10507	T265_00373	A0A074Z272	A0A075AJT4	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.541
T265_10507	T265_00374	A0A074Z272	A0A075AD02	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.920
T265_10507	T265_03298	A0A074Z272	A0A074ZS54	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.918
T265_10507	T265_10505	A0A074Z272	A0A074Z216	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.957