(21 nodes) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12984	AA_TRNA_LIGASE_II domain-containing protein. (583 aa)
	T265_03894	Uncharacterized protein. (1261 aa)
	T265_03705	B5 domain-containing protein. (568 aa)
	T265_13902	AA_TRNA_LIGASE_II domain-containing protein. (571 aa)
	T265_14369	Uncharacterized protein. (565 aa)
	T265_13744	AA_TRNA_LIGASE_II domain-containing protein. (573 aa)
	T265_14849	AA_TRNA_LIGASE_II domain-containing protein. (949 aa)
	T265_06648	Uncharacterized protein. (130 aa)
	T265_05275	AA_TRNA_LIGASE_II domain-containing protein. (550 aa)
	T265_14558	tRNA-synt_2b domain-containing protein. (297 aa)
	T265_13178	Uncharacterized protein. (698 aa)
	T265_12452	BPL/LPL catalytic domain-containing protein. (262 aa)
	T265_05041	Uncharacterized protein. (2064 aa)
	T265_04925	Uncharacterized protein. (964 aa)
	T265_02835	AA_TRNA_LIGASE_II domain-containing protein. (592 aa)
	T265_03456	AA_TRNA_LIGASE_II_ALA domain-containing protein. (1344 aa)
	T265_10380	AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (987 aa)
	T265_08946	Lysine--tRNA ligase. (644 aa)
	T265_00610	Uncharacterized protein. (1292 aa)
	T265_01087	AA_TRNA_LIGASE_II domain-containing protein. (737 aa)
	T265_02630	AA_TRNA_LIGASE_II domain-containing protein. (1171 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00610	T265_01087	A0A075A186	A0A075A0V7	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.742
T265_00610	T265_02630	A0A075A186	A0A074ZYK0	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.968
T265_00610	T265_02835	A0A075A186	A0A074ZUK2	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.963
T265_00610	T265_03456	A0A075A186	A0A074ZW29	Uncharacterized protein.	AA_TRNA_LIGASE_II_ALA domain-containing protein.	0.818
T265_00610	T265_03705	A0A075A186	A0A074ZQV9	Uncharacterized protein.	B5 domain-containing protein.	0.534
T265_00610	T265_04925	A0A075A186	A0A075AFX8	Uncharacterized protein.	Uncharacterized protein.	0.724
T265_00610	T265_05041	A0A075A186	A0A075AFT3	Uncharacterized protein.	Uncharacterized protein.	0.466
T265_00610	T265_05275	A0A075A186	A0A074ZL01	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.732
T265_00610	T265_08946	A0A075A186	A0A074Z7C7	Uncharacterized protein.	Lysine--tRNA ligase.	0.802
T265_00610	T265_10380	A0A075A186	A0A074Z6S6	Uncharacterized protein.	AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	0.893
T265_00610	T265_13744	A0A075A186	A0A074ZL13	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.517
T265_00610	T265_13902	A0A075A186	A0A074ZMC9	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.663
T265_00610	T265_14369	A0A075A186	A0A074ZBJ9	Uncharacterized protein.	Uncharacterized protein.	0.786
T265_00610	T265_14558	A0A075A186	A0A074ZKE2	Uncharacterized protein.	tRNA-synt_2b domain-containing protein.	0.669
T265_00610	T265_14849	A0A075A186	A0A074ZGV2	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.659
T265_01087	T265_00610	A0A075A0V7	A0A075A186	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.742
T265_01087	T265_02630	A0A075A0V7	A0A074ZYK0	AA_TRNA_LIGASE_II domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.846
T265_01087	T265_02835	A0A075A0V7	A0A074ZUK2	AA_TRNA_LIGASE_II domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.729
T265_01087	T265_03456	A0A075A0V7	A0A074ZW29	AA_TRNA_LIGASE_II domain-containing protein.	AA_TRNA_LIGASE_II_ALA domain-containing protein.	0.553
T265_01087	T265_03705	A0A075A0V7	A0A074ZQV9	AA_TRNA_LIGASE_II domain-containing protein.	B5 domain-containing protein.	0.577