36 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12402	Histone H2B; Belongs to the histone H2B family. (64 aa)
	T265_12280	Uncharacterized protein. (98 aa)
	T265_03554	Histone H2B; Belongs to the histone H2B family. (122 aa)
	T265_15522	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
	T265_16047	Uncharacterized protein. (68 aa)
	T265_15432	Uncharacterized protein. (404 aa)
	T265_11049	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
	T265_09389	CULLIN_2 domain-containing protein. (1718 aa)
	T265_11496	Uncharacterized protein. (344 aa)
	T265_09868	Non-specific serine/threonine protein kinase. (634 aa)
	T265_07863	Ubiquitin-like domain-containing protein. (128 aa)
	T265_06070	TPR_REGION domain-containing protein. (758 aa)
	T265_05477	Uncharacterized protein. (845 aa)
	T265_05375	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (205 aa)
	T265_04983	Homeobox domain-containing protein. (454 aa)
	T265_04868	Uncharacterized protein. (1180 aa)
	T265_05840	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	T265_04148	Proteasome/cyclosome repeat protein. (2834 aa)
	T265_03692	Uncharacterized protein. (235 aa)
	T265_13200	Uncharacterized protein. (296 aa)
	T265_04450	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (301 aa)
	T265_13998	Protein kinase domain-containing protein. (207 aa)
	T265_06348	Homeobox domain-containing protein. (139 aa)
	T265_16037	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (176 aa)
	T265_04102	Homeobox domain-containing protein. (309 aa)
	T265_00652	Uncharacterized protein. (192 aa)
	T265_00470	Ubiquitin-like domain-containing protein. (197 aa)
	T265_00723	Uncharacterized protein. (820 aa)
	T265_14532	Uncharacterized protein. (508 aa)
	T265_07666	ANAPC4_WD40 domain-containing protein. (554 aa)
	T265_07360	Uncharacterized protein. (456 aa)
	T265_05828	Core histone H2A/H2B/H3/H4; Belongs to the histone H2B family. (108 aa)
	T265_05709	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (172 aa)
	T265_13695	TPR_REGION domain-containing protein. (775 aa)
	T265_01789	Homeobox domain-containing protein. (591 aa)
	T265_01309	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (412 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00470	T265_00723	A0A075A368	A0A075A537	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.677
T265_00470	T265_03554	A0A075A368	A0A074YVS2	Ubiquitin-like domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.733
T265_00470	T265_04148	A0A075A368	A0A074ZP24	Ubiquitin-like domain-containing protein.	Proteasome/cyclosome repeat protein.	0.727
T265_00470	T265_04450	A0A075A368	A0A074ZSF7	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.923
T265_00470	T265_04868	A0A075A368	A0A074ZMG0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.724
T265_00470	T265_05375	A0A075A368	A0A074ZK30	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.771
T265_00470	T265_05477	A0A075A368	A0A074ZJJ3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.735
T265_00470	T265_05709	A0A075A368	A0A075AEX9	Ubiquitin-like domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.780
T265_00470	T265_05828	A0A075A368	A0A075AEU4	Ubiquitin-like domain-containing protein.	Core histone H2A/H2B/H3/H4; Belongs to the histone H2B family.	0.733
T265_00470	T265_05840	A0A075A368	A0A074ZML9	Ubiquitin-like domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.780
T265_00470	T265_06070	A0A075A368	A0A074ZHI0	Ubiquitin-like domain-containing protein.	TPR_REGION domain-containing protein.	0.728
T265_00470	T265_07360	A0A075A368	A0A075ABW4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.996
T265_00470	T265_07666	A0A075A368	A0A075AB14	Ubiquitin-like domain-containing protein.	ANAPC4_WD40 domain-containing protein.	0.714
T265_00470	T265_07863	A0A075A368	A0A074ZFT3	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.999
T265_00470	T265_09389	A0A075A368	A0A074Z654	Ubiquitin-like domain-containing protein.	CULLIN_2 domain-containing protein.	0.918
T265_00470	T265_11049	A0A075A368	A0A074Z4F0	Ubiquitin-like domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.780
T265_00470	T265_12280	A0A075A368	A0A074YUF1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.661
T265_00470	T265_12402	A0A075A368	A0A074YT82	Ubiquitin-like domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.733
T265_00470	T265_13695	A0A075A368	A0A075AFN2	Ubiquitin-like domain-containing protein.	TPR_REGION domain-containing protein.	0.717
T265_00470	T265_15522	A0A075A368	A0A074YXW8	Ubiquitin-like domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.780