26 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_04975	Uncharacterized protein. (339 aa)
	T265_16241	Uncharacterized protein. (154 aa)
	T265_15925	Uncharacterized protein. (93 aa)
	T265_15923	Uncharacterized protein. (220 aa)
	T265_11297	Uncharacterized protein. (332 aa)
	T265_11684	Uncharacterized protein. (446 aa)
	T265_09888	AMPKBI domain-containing protein. (341 aa)
	T265_09629	AMPKBI domain-containing protein. (515 aa)
	T265_09902	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3314 aa)
	T265_14001	Uncharacterized protein. (688 aa)
	T265_06242	WD_REPEATS_REGION domain-containing protein. (323 aa)
	T265_05226	Uncharacterized protein. (1341 aa)
	T265_13708	Aa_trans domain-containing protein. (620 aa)
	T265_14535	Uncharacterized protein. (64 aa)
	T265_11486	Uncharacterized protein. (111 aa)
	T265_01458	Protein kinase domain-containing protein. (765 aa)
	T265_03756	Uncharacterized protein. (282 aa)
	T265_12465	Uncharacterized protein. (331 aa)
	T265_08500	Uncharacterized protein. (418 aa)
	T265_14534	Uncharacterized protein. (70 aa)
	T265_05450	Uncharacterized protein. (571 aa)
	T265_04823	Protein kinase domain-containing protein. (1040 aa)
	T265_13262	Uncharacterized protein. (1378 aa)
	T265_13018	Non-specific serine/threonine protein kinase. (751 aa)
	T265_02419	WD_REPEATS_REGION domain-containing protein. (2272 aa)
	T265_01387	Reverse transcriptase domain-containing protein. (1365 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01458	T265_11684	A0A075A2B2	A0A074Z252	Protein kinase domain-containing protein.	Uncharacterized protein.	0.783
T265_01458	T265_13018	A0A075A2B2	A0A075AIA4	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.470
T265_02419	T265_03756	A0A075AIC0	A0A075A2B6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.994
T265_02419	T265_04823	A0A075AIC0	A0A075AG16	WD_REPEATS_REGION domain-containing protein.	Protein kinase domain-containing protein.	0.637
T265_02419	T265_04975	A0A075AIC0	A0A075AFW9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.995
T265_02419	T265_05226	A0A075AIC0	A0A074ZKE9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.449
T265_02419	T265_05450	A0A075AIC0	A0A075AF91	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.995
T265_02419	T265_06242	A0A075AIC0	A0A074ZGW4	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
T265_02419	T265_08500	A0A075AIC0	A0A075A850	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.989
T265_02419	T265_09629	A0A075AIC0	A0A074Z556	WD_REPEATS_REGION domain-containing protein.	AMPKBI domain-containing protein.	0.619
T265_02419	T265_09888	A0A075AIC0	A0A074Z4A1	WD_REPEATS_REGION domain-containing protein.	AMPKBI domain-containing protein.	0.619
T265_02419	T265_09902	A0A075AIC0	A0A074Z8G6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.999
T265_02419	T265_11297	A0A075AIC0	A0A074YZ55	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
T265_02419	T265_11486	A0A075AIC0	A0A074ZXB3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.449
T265_02419	T265_12465	A0A075AIC0	A0A075A6H6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.590
T265_02419	T265_13018	A0A075AIC0	A0A075AIA4	WD_REPEATS_REGION domain-containing protein.	Non-specific serine/threonine protein kinase.	0.984
T265_02419	T265_13262	A0A075AIC0	A0A075AHJ2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.449
T265_02419	T265_13708	A0A075AIC0	A0A074ZKG5	WD_REPEATS_REGION domain-containing protein.	Aa_trans domain-containing protein.	0.687
T265_02419	T265_14001	A0A075AIC0	A0A074ZGL0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.590
T265_02419	T265_14534	A0A075AIC0	A0A075A8R3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.900