109 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16131	Uncharacterized protein. (66 aa)
	T265_12201	Uncharacterized protein. (44 aa)
	T265_15640	Uncharacterized protein. (63 aa)
	T265_11834	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1405 aa)
	T265_16180	Ig-like domain-containing protein. (115 aa)
	T265_15433	Uncharacterized protein. (151 aa)
	T265_11086	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (155 aa)
	T265_15786	APP_E2 domain-containing protein. (171 aa)
	T265_11088	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (136 aa)
	T265_10655	Ras-associating domain-containing protein. (816 aa)
	T265_11464	BTB/POZ domain protein. (381 aa)
	T265_10204	Tetraspanin. (223 aa)
	T265_15409	Uncharacterized protein. (531 aa)
	T265_14896	Uncharacterized protein. (305 aa)
	T265_12242	Fibronectin type-III domain-containing protein. (179 aa)
	T265_14844	Uncharacterized protein. (160 aa)
	T265_14735	Uncharacterized protein. (2826 aa)
	T265_10146	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1072 aa)
	T265_08893	Annexin. (354 aa)
	T265_15577	CUB domain-containing protein. (128 aa)
	T265_08672	AAA domain-containing protein. (603 aa)
	T265_14566	Sulfhydryl oxidase. (349 aa)
	T265_14428	Thioredoxin domain-containing protein. (513 aa)
	T265_08966	Uncharacterized protein. (353 aa)
	T265_15254	Uncharacterized protein. (98 aa)
	T265_08894	Annexin. (390 aa)
	T265_10641	Tetraspanin. (252 aa)
	T265_14275	Uncharacterized protein. (480 aa)
	T265_07354	Uncharacterized protein. (71 aa)
	T265_10296	SUZ domain-containing protein. (277 aa)
	T265_08063	Tetraspanin. (576 aa)
	T265_06464	Uncharacterized protein. (860 aa)
	T265_07378	Uncharacterized protein. (695 aa)
	T265_14252	Uncharacterized protein. (840 aa)
	T265_05713	Uncharacterized protein. (870 aa)
	T265_05472	MFS domain-containing protein. (528 aa)
	T265_05353	Uncharacterized protein. (606 aa)
	T265_08407	Thioredoxin domain-containing protein. (271 aa)
	T265_06196	Uncharacterized protein. (1567 aa)
	T265_06201	BTB domain-containing protein. (388 aa)
	T265_05098	FERM domain-containing protein. (2865 aa)
	T265_04735	Uncharacterized protein. (3425 aa)
	T265_13894	Diacylglycerol kinase. (1360 aa)
	T265_05807	Glyco_18 domain-containing protein. (338 aa)
	T265_04284	MFS_1_like domain-containing protein. (553 aa)
	T265_07457	Uncharacterized protein. (286 aa)
	T265_14265	CUB domain-containing protein. (190 aa)
	T265_07226	Uncharacterized protein. (1086 aa)
	T265_03834	Uncharacterized protein. (801 aa)
	T265_14201	Tetraspanin. (187 aa)
	T265_03781	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (437 aa)
	T265_06717	Kinase domain protein; Belongs to the protein kinase superfamily. (497 aa)
	T265_03614	WD domain, G-beta repeat protein. (167 aa)
	T265_03429	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (510 aa)
	T265_06373	Uncharacterized protein. (1385 aa)
	T265_04399	Uncharacterized protein. (353 aa)
	T265_04283	MFS_1_like domain-containing protein. (530 aa)
	T265_03036	Transgelin; Belongs to the calponin family. (190 aa)
	T265_15785	Uncharacterized protein. (215 aa)
	T265_03887	Uncharacterized protein. (352 aa)
	T265_02317	WD_REPEATS_REGION domain-containing protein. (625 aa)
	T265_13295	WD domain, G-beta repeat protein. (165 aa)
	T265_03635	SH3 domain-containing protein. (682 aa)
	T265_05469	Uncharacterized protein. (461 aa)
	T265_02349	WD_REPEATS_REGION domain-containing protein. (405 aa)
	T265_02293	WD domain, G-beta repeat protein. (383 aa)
	T265_02223	Tetraspanin. (225 aa)
	T265_01793	Uncharacterized protein. (83 aa)
	T265_01519	Diacylglycerol kinase. (1321 aa)
	T265_01396	EGF-like domain-containing protein. (3533 aa)
	T265_10927	Tr-type G domain-containing protein. (691 aa)
	T265_13484	Hydrolase_4 domain-containing protein. (334 aa)
	T265_13362	Tr-type G domain-containing protein. (666 aa)
	T265_10134	WD_REPEATS_REGION domain-containing protein. (502 aa)
	T265_00488	Ras-associating domain-containing protein. (471 aa)
	T265_03689	Uncharacterized protein. (645 aa)
	T265_03694	Uncharacterized protein. (1798 aa)
	T265_00253	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (672 aa)
	T265_00444	Uncharacterized protein. (163 aa)
	T265_09851	Tetraspanin. (296 aa)
	T265_01026	Reverse transcriptase domain-containing protein. (144 aa)
	T265_03099	Ig-like domain-containing protein. (213 aa)
	T265_03109	Uncharacterized protein. (4297 aa)
	T265_00819	Annexin. (321 aa)
	T265_02871	Uncharacterized protein. (180 aa)
	T265_13098	CUB domain-containing protein. (138 aa)
	T265_02755	Tetraspanin. (271 aa)
	T265_00309	Uncharacterized protein. (259 aa)
	T265_02348	WD_REPEATS_REGION domain-containing protein. (140 aa)
	T265_12802	Tetraspanin. (141 aa)
	T265_01494	Uncharacterized protein. (276 aa)
	T265_08065	Tetraspanin. (230 aa)
	T265_07836	Protein kinase C. (715 aa)
	T265_07384	HABP4_PAI-RBP1 domain-containing protein. (404 aa)
	T265_12644	Annexin. (750 aa)
	T265_14270	Diacylglycerol kinase. (887 aa)
	T265_00458	Prenylcys_lyase domain-containing protein. (523 aa)
	T265_06499	Lipase_3 domain-containing protein. (838 aa)
	T265_04541	WD_REPEATS_REGION domain-containing protein. (370 aa)
	T265_13495	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (193 aa)
	T265_04117	A4_EXTRA domain-containing protein. (850 aa)
	T265_03946	Tr-type G domain-containing protein. (1242 aa)
	T265_13328	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (218 aa)
	T265_03603	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (724 aa)
	T265_02870	Uncharacterized protein. (274 aa)
	T265_02154	MFS_1_like domain-containing protein. (731 aa)
	T265_12643	Annexin. (607 aa)
	T265_00402	Endonuclease. (186 aa)
	T265_00148	Uncharacterized protein. (219 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00148	T265_00444	A0A075AK07	A0A075A336	Uncharacterized protein.	Uncharacterized protein.	0.600
T265_00253	T265_03603	A0A075A2Z6	A0A075AHF7	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.472
T265_00253	T265_03781	A0A075A2Z6	A0A074ZQM3	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.635
T265_00253	T265_06717	A0A075A2Z6	A0A074ZRD6	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Kinase domain protein; Belongs to the protein kinase superfamily.	0.511
T265_00253	T265_10146	A0A075A2Z6	A0A074Z7I3	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.593
T265_00253	T265_13328	A0A075A2Z6	A0A075AHD3	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.472
T265_00253	T265_14896	A0A075A2Z6	A0A074Z5B5	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.423
T265_00253	T265_15254	A0A075A2Z6	A0A074ZBZ3	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.423
T265_00309	T265_00488	A0A075A694	A0A075A2K5	Uncharacterized protein.	Ras-associating domain-containing protein.	0.482
T265_00309	T265_02870	A0A075A694	A0A075AHZ0	Uncharacterized protein.	Uncharacterized protein.	0.589
T265_00309	T265_02871	A0A075A694	A0A075A569	Uncharacterized protein.	Uncharacterized protein.	0.589
T265_00309	T265_03099	A0A075A694	A0A075A4H7	Uncharacterized protein.	Ig-like domain-containing protein.	0.761
T265_00309	T265_03109	A0A075A694	A0A075A4I3	Uncharacterized protein.	Uncharacterized protein.	0.761
T265_00309	T265_03635	A0A075A694	A0A074ZVE5	Uncharacterized protein.	SH3 domain-containing protein.	0.555
T265_00309	T265_03834	A0A075A694	A0A074ZQ27	Uncharacterized protein.	Uncharacterized protein.	0.468
T265_00309	T265_04735	A0A075A694	A0A074ZM18	Uncharacterized protein.	Uncharacterized protein.	0.589
T265_00309	T265_06196	A0A075A694	A0A074ZL87	Uncharacterized protein.	Uncharacterized protein.	0.403
T265_00309	T265_06464	A0A075A694	A0A074ZGD6	Uncharacterized protein.	Uncharacterized protein.	0.467
T265_00309	T265_06717	A0A075A694	A0A074ZRD6	Uncharacterized protein.	Kinase domain protein; Belongs to the protein kinase superfamily.	0.422
T265_00309	T265_07226	A0A075A694	A0A074ZPN8	Uncharacterized protein.	Uncharacterized protein.	0.890