51 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11297	Uncharacterized protein. (332 aa)
	T265_11215	Uncharacterized protein. (279 aa)
	T265_11112	Uncharacterized protein. (142 aa)
	T265_11589	Uncharacterized protein. (1720 aa)
	T265_10139	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (167 aa)
	T265_11160	Uncharacterized protein. (399 aa)
	T265_08849	Uncharacterized protein. (1217 aa)
	T265_09902	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3314 aa)
	T265_14328	Uncharacterized protein. (1345 aa)
	T265_07218	Uncharacterized protein. (384 aa)
	T265_07028	Uncharacterized protein. (460 aa)
	T265_06723	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (413 aa)
	T265_06242	WD_REPEATS_REGION domain-containing protein. (323 aa)
	T265_06567	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (525 aa)
	T265_13708	Aa_trans domain-containing protein. (620 aa)
	T265_14535	Uncharacterized protein. (64 aa)
	T265_06319	Uncharacterized protein. (1037 aa)
	T265_04233	V-type ATPase, D subunit. (250 aa)
	T265_04798	Uncharacterized protein. (1442 aa)
	T265_03934	TOG domain-containing protein. (2826 aa)
	T265_03322	Uncharacterized protein. (608 aa)
	T265_02114	Uncharacterized protein. (305 aa)
	T265_11328	ATP synthase, subunit E. (142 aa)
	T265_04794	DEP domain-containing protein. (862 aa)
	T265_12853	Reverse transcriptase domain-containing protein. (1163 aa)
	T265_04816	V-ATPase_H_C domain-containing protein. (1024 aa)
	T265_15308	Uncharacterized protein. (695 aa)
	T265_13501	DM domain-containing protein. (174 aa)
	T265_00896	UDENN FLCN/SMCR8-type domain-containing protein. (723 aa)
	T265_03756	Uncharacterized protein. (282 aa)
	T265_00767	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (153 aa)
	T265_02981	Uncharacterized protein. (888 aa)
	T265_13041	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (401 aa)
	T265_02528	RWD domain protein. (329 aa)
	T265_00022	BZIP transcription factor. (760 aa)
	T265_08788	Uncharacterized protein. (701 aa)
	T265_08500	Uncharacterized protein. (418 aa)
	T265_14534	Uncharacterized protein. (70 aa)
	T265_07348	Uncharacterized protein. (579 aa)
	T265_07027	Uncharacterized protein. (3998 aa)
	T265_06965	Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family. (219 aa)
	T265_06110	Uncharacterized protein. (1266 aa)
	T265_05450	Uncharacterized protein. (571 aa)
	T265_05041	Uncharacterized protein. (2064 aa)
	T265_04975	Uncharacterized protein. (339 aa)
	T265_03389	SH2 domain-containing protein. (1325 aa)
	T265_02690	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (125 aa)
	T265_02419	WD_REPEATS_REGION domain-containing protein. (2272 aa)
	T265_01387	Reverse transcriptase domain-containing protein. (1365 aa)
	T265_15989	Zinc_ribbon_16 domain-containing protein. (151 aa)
	T265_12366	Uncharacterized protein. (137 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00767	T265_00896	A0A075A4R0	A0A075A1J2	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	UDENN FLCN/SMCR8-type domain-containing protein.	0.520
T265_00767	T265_02419	A0A075A4R0	A0A075AIC0	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	WD_REPEATS_REGION domain-containing protein.	0.622
T265_00767	T265_02690	A0A075A4R0	A0A075AI49	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.903
T265_00767	T265_02981	A0A075A4R0	A0A075A4X9	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.524
T265_00767	T265_03322	A0A075A4R0	A0A074ZWC3	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.463
T265_00767	T265_03756	A0A075A4R0	A0A075A2B6	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.439
T265_00767	T265_04233	A0A075A4R0	A0A074ZPL1	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type ATPase, D subunit.	0.988
T265_00767	T265_04816	A0A075A4R0	A0A074ZYF8	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-ATPase_H_C domain-containing protein.	0.981
T265_00767	T265_04975	A0A075A4R0	A0A075AFW9	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.566
T265_00767	T265_05450	A0A075A4R0	A0A075AF91	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.545
T265_00767	T265_06242	A0A075A4R0	A0A074ZGW4	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	WD_REPEATS_REGION domain-containing protein.	0.619
T265_00767	T265_06567	A0A075A4R0	A0A074ZJY6	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.993
T265_00767	T265_06723	A0A075A4R0	A0A074ZF49	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.981
T265_00767	T265_06965	A0A075A4R0	A0A075ACT6	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.	0.998
T265_00767	T265_07218	A0A075A4R0	A0A074ZDG9	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.981
T265_00767	T265_07348	A0A075A4R0	A0A075ABU7	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.994
T265_00767	T265_08500	A0A075A4R0	A0A075A850	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.450
T265_00767	T265_09902	A0A075A4R0	A0A074Z8G6	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.587
T265_00767	T265_10139	A0A075A4R0	A0A074Z3D9	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.902
T265_00767	T265_11112	A0A075A4R0	A0A074Z057	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.946