(34 nodes) Immunoglobulin like network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_05646	Uncharacterized protein. (2307 aa)
	T265_04820	Uncharacterized protein. (419 aa)
	T265_14313	Uncharacterized protein. (1271 aa)
	T265_14114	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1478 aa)
	T265_03097	Uncharacterized protein. (3411 aa)
	T265_03095	Uncharacterized protein. (10941 aa)
	T265_13108	Ig-like domain-containing protein. (848 aa)
	T265_02206	Uncharacterized protein. (1757 aa)
	T265_05328	Uncharacterized protein. (1603 aa)
	T265_12892	Uncharacterized protein. (820 aa)
	T265_12810	Uncharacterized protein. (406 aa)
	T265_01760	Uncharacterized protein. (954 aa)
	T265_01912	Uncharacterized protein. (1893 aa)
	T265_00915	Uncharacterized protein. (4468 aa)
	T265_03713	Uncharacterized protein. (990 aa)
	T265_12500	Uncharacterized protein. (5487 aa)
	T265_00466	Uncharacterized protein. (6760 aa)
	T265_03109	Uncharacterized protein. (4297 aa)
	T265_00479	Uncharacterized protein. (2474 aa)
	T265_08102	Uncharacterized protein. (1020 aa)
	T265_14339	Uncharacterized protein. (1838 aa)
	T265_12484	Uncharacterized protein. (1541 aa)
	T265_05496	Uncharacterized protein. (814 aa)
	T265_01778	Uncharacterized protein. (1527 aa)
	T265_12698	Uncharacterized protein. (452 aa)
	T265_12449	Uncharacterized protein. (429 aa)
	T265_07548	Ig-like domain-containing protein. (6193 aa)
	T265_09472	Uncharacterized protein. (2039 aa)
	T265_07964	Uncharacterized protein. (1330 aa)
	T265_14928	Uncharacterized protein. (1708 aa)
	T265_14701	Uncharacterized protein. (389 aa)
	T265_15051	Uncharacterized protein. (6861 aa)
	T265_09735	Uncharacterized protein. (1120 aa)
	T265_10050	Uncharacterized protein. (1336 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00479	T265_14114	A0A075A666	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.651
T265_01760	T265_02206	A0A074ZYJ5	A0A074ZVR8	Uncharacterized protein.	Uncharacterized protein.	0.988
T265_01760	T265_08102	A0A074ZYJ5	A0A075A9K2	Uncharacterized protein.	Uncharacterized protein.	0.490
T265_01760	T265_14114	A0A074ZYJ5	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.602
T265_02206	T265_01760	A0A074ZVR8	A0A074ZYJ5	Uncharacterized protein.	Uncharacterized protein.	0.988
T265_02206	T265_14114	A0A074ZVR8	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.425
T265_03095	T265_03109	A0A074ZTN8	A0A075A4I3	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03095	T265_14114	A0A074ZTN8	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.419
T265_03097	T265_03109	A0A074ZST5	A0A075A4I3	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03097	T265_14114	A0A074ZST5	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.419
T265_03109	T265_03095	A0A075A4I3	A0A074ZTN8	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03109	T265_03097	A0A075A4I3	A0A074ZST5	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03109	T265_03713	A0A075A4I3	A0A075A2F5	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03109	T265_12892	A0A075A4I3	A0A074ZWZ1	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03109	T265_14114	A0A075A4I3	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.651
T265_03109	T265_15051	A0A075A4I3	A0A074Z7P4	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03713	T265_03109	A0A075A2F5	A0A075A4I3	Uncharacterized protein.	Uncharacterized protein.	0.433
T265_03713	T265_14114	A0A075A2F5	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.419
T265_04820	T265_14114	A0A074ZMH4	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.560
T265_05328	T265_14114	A0A074ZWJ0	A0A074ZRB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.560