STRINGSTRING
T265_11825 T265_11825 T265_11773 T265_11773 T265_10978 T265_10978 T265_10500 T265_10500 T265_15170 T265_15170 T265_15451 T265_15451 T265_15424 T265_15424 T265_15075 T265_15075 T265_11153 T265_11153 T265_09918 T265_09918 T265_15333 T265_15333 T265_10968 T265_10968 T265_10864 T265_10864 T265_09555 T265_09555 T265_09341 T265_09341 T265_14748 T265_14748 T265_15517 T265_15517 T265_08568 T265_08568 T265_11132 T265_11132 T265_10894 T265_10894 T265_10323 T265_10323 T265_14223 T265_14223 T265_10243 T265_10243 T265_10138 T265_10138 T265_06846 T265_06846 T265_06548 T265_06548 T265_09400 T265_09400 T265_09261 T265_09261 T265_08609 T265_08609 T265_06603 T265_06603 T265_05487 T265_05487 T265_05025 T265_05025 T265_04793 T265_04793 T265_05701 T265_05701 T265_04343 T265_04343 T265_03762 T265_03762 T265_06949 T265_06949 T265_13252 T265_13252 T265_03684 T265_03684 T265_04671 T265_04671 T265_04579 T265_04579 T265_06209 T265_06209 T265_04165 T265_04165 T265_15800 T265_15800 T265_02688 T265_02688 T265_02354 T265_02354 T265_03246 T265_03246 T265_15465 T265_15465 T265_13657 T265_13657 T265_01946 T265_01946 T265_01951 T265_01951 T265_13111 T265_13111 T265_11300 T265_11300 T265_15313 T265_15313 T265_12690 T265_12690 T265_03954 T265_03954 T265_03736 T265_03736 T265_14962 T265_14962 T265_02881 T265_02881 T265_12540 T265_12540 T265_01304 T265_01304 T265_01349 T265_01349 T265_01122 T265_01122 T265_00997 T265_00997 T265_06752 T265_06752 T265_06732 T265_06732 T265_02907 T265_02907 T265_00534 T265_00534 T265_00446 T265_00446 T265_00468 T265_00468 T265_12557 T265_12557 T265_12486 T265_12486
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T265_11825Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (443 aa)
T265_11773Fip1 domain-containing protein. (606 aa)
T265_10978Uncharacterized protein. (866 aa)
T265_10500Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (931 aa)
T265_15170Uncharacterized protein. (624 aa)
T265_15451Smg4_UPF3 domain-containing protein. (650 aa)
T265_15424Uncharacterized protein. (575 aa)
T265_15075Uncharacterized protein. (799 aa)
T265_11153Mago nashi protein. (102 aa)
T265_09918Mago-bind domain-containing protein. (328 aa)
T265_15333Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (307 aa)
T265_10968MIF4G domain-containing protein. (956 aa)
T265_10864Uncharacterized protein; Belongs to the DEAD box helicase family. (469 aa)
T265_09555Uncharacterized protein. (1102 aa)
T265_09341Uncharacterized protein. (388 aa)
T265_14748Reverse transcriptase domain-containing protein. (967 aa)
T265_15517Uncharacterized protein. (311 aa)
T265_08568Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (506 aa)
T265_11132PWI domain-containing protein. (247 aa)
T265_10894Uncharacterized protein. (697 aa)
T265_10323Uncharacterized protein. (258 aa)
T265_14223RanBP2-type domain-containing protein. (443 aa)
T265_10243Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (318 aa)
T265_10138Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (518 aa)
T265_06846Peptide chain release factor eRF/aRF, subunit 1. (440 aa)
T265_06548Sin3 associated polypeptide p18. (234 aa)
T265_09400RRM domain-containing protein. (206 aa)
T265_09261Uncharacterized protein. (1895 aa)
T265_08609eRF1_1 domain-containing protein. (556 aa)
T265_06603Cleavage and polyadenylation specificity factor subunit 2. (1159 aa)
T265_05487WD_REPEATS_REGION domain-containing protein. (325 aa)
T265_05025Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (305 aa)
T265_04793RRM domain-containing protein. (437 aa)
T265_05701Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (682 aa)
T265_04343WD_REPEATS_REGION domain-containing protein. (726 aa)
T265_03762Serine/threonine-protein phosphatase. (274 aa)
T265_06949DEAD/DEAH box helicase. (426 aa)
T265_13252Uncharacterized protein. (358 aa)
T265_03684Uncharacterized protein. (1235 aa)
T265_04671Uncharacterized protein. (810 aa)
T265_04579Uncharacterized protein. (602 aa)
T265_06209Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4263 aa)
T265_04165Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (215 aa)
T265_15800Serine/threonine-protein phosphatase. (374 aa)
T265_02688WD_REPEATS_REGION domain-containing protein. (441 aa)
T265_02354Uncharacterized protein. (1461 aa)
T265_03246Uncharacterized protein. (436 aa)
T265_15465mRNA cap 0 methyltransferase domain-containing protein. (386 aa)
T265_13657Serine/threonine-protein phosphatase. (339 aa)
T265_01946Uncharacterized protein. (491 aa)
T265_01951EF-hand domain-containing protein. (929 aa)
T265_13111Serine/threonine-protein phosphatase. (423 aa)
T265_11300Nuclear cap-binding protein subunit 2. (159 aa)
T265_15313RRM domain-containing protein. (273 aa)
T265_12690Uncharacterized protein. (790 aa)
T265_03954Uncharacterized protein. (628 aa)
T265_03736Uncharacterized protein. (361 aa)
T265_14962Tr-type G domain-containing protein. (513 aa)
T265_02881Serine/threonine-protein phosphatase. (368 aa)
T265_12540SER_THR_PHOSPHATASE domain-containing protein. (372 aa)
T265_01304Uncharacterized protein; Belongs to the DEAD box helicase family. (664 aa)
T265_01349Reverse transcriptase domain-containing protein. (2192 aa)
T265_01122RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (177 aa)
T265_00997Btz domain-containing protein. (780 aa)
T265_06752Uncharacterized protein. (1534 aa)
T265_06732CID domain-containing protein. (961 aa)
T265_02907Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (752 aa)
T265_00534Uncharacterized protein. (518 aa)
T265_00446SER_THR_PHOSPHATASE domain-containing protein. (420 aa)
T265_00468MPN domain-containing protein. (1771 aa)
T265_12557RRM domain-containing protein. (275 aa)
T265_12486Tr-type G domain-containing protein. (945 aa)
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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