81 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12118	Protein kinase domain-containing protein. (668 aa)
	T265_11965	Eukaryotic aspartyl protease; Belongs to the peptidase A1 family. (239 aa)
	T265_11834	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1405 aa)
	T265_11591	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (190 aa)
	T265_11297	Uncharacterized protein. (332 aa)
	T265_15347	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (243 aa)
	T265_10587	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (452 aa)
	T265_11747	Protein kinase domain-containing protein. (326 aa)
	T265_09997	Uncharacterized protein. (353 aa)
	T265_09960	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (248 aa)
	T265_09866	SNARE domain protein. (235 aa)
	T265_09755	Uncharacterized protein; Belongs to the protein kinase superfamily. (390 aa)
	T265_09448	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (235 aa)
	T265_09451	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (454 aa)
	T265_14820	WD_REPEATS_REGION domain-containing protein. (507 aa)
	T265_15019	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (698 aa)
	T265_09902	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3314 aa)
	T265_09850	Uncharacterized protein. (368 aa)
	T265_08327	Mitogen-activated protein kinase. (386 aa)
	T265_07686	Phosphatase tensin-type domain-containing protein. (643 aa)
	T265_07736	DUF4604 domain-containing protein. (566 aa)
	T265_07602	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (551 aa)
	T265_14333	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (277 aa)
	T265_07607	Papain family cysteine protease; Belongs to the peptidase C1 family. (337 aa)
	T265_08824	Uncharacterized protein. (190 aa)
	T265_15041	Uncharacterized protein. (182 aa)
	T265_15011	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (243 aa)
	T265_06662	Kinase domain protein; Belongs to the protein kinase superfamily. (350 aa)
	T265_09450	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (331 aa)
	T265_09452	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (217 aa)
	T265_06242	WD_REPEATS_REGION domain-containing protein. (323 aa)
	T265_14825	Uncharacterized protein; Belongs to the protein kinase superfamily. (343 aa)
	T265_09101	Uncharacterized protein. (340 aa)
	T265_08371	Uncharacterized protein. (482 aa)
	T265_07624	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (557 aa)
	T265_07601	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (377 aa)
	T265_14335	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (360 aa)
	T265_05693	Papain family cysteine protease; Belongs to the peptidase C1 family. (346 aa)
	T265_06717	Kinase domain protein; Belongs to the protein kinase superfamily. (497 aa)
	T265_06651	Protein kinase domain-containing protein. (403 aa)
	T265_03212	Papain family cysteine protease; Belongs to the peptidase C1 family. (368 aa)
	T265_16159	Inhibitor_I29 domain-containing protein. (193 aa)
	T265_13998	Protein kinase domain-containing protein. (207 aa)
	T265_16037	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (176 aa)
	T265_02979	DUF4206 domain-containing protein. (910 aa)
	T265_03124	S1 motif domain-containing protein. (329 aa)
	T265_03029	V-SNARE coiled-coil homology domain-containing protein. (105 aa)
	T265_02386	Uncharacterized protein. (885 aa)
	T265_03302	Phosphatidylinositol 3-kinase catalytic subunit type 3. (992 aa)
	T265_13709	Uncharacterized protein; Belongs to the protein kinase superfamily. (345 aa)
	T265_01821	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (409 aa)
	T265_05066	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (204 aa)
	T265_15372	BAR domain-containing protein. (205 aa)
	T265_11050	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (295 aa)
	T265_13523	Uncharacterized protein. (897 aa)
	T265_04419	Autophagy-related protein 3. (379 aa)
	T265_12945	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (1077 aa)
	T265_12726	Myotubularin phosphatase domain-containing protein. (1384 aa)
	T265_01961	Uncharacterized protein; Belongs to the peptidase C1 family. (385 aa)
	T265_01981	Uncharacterized protein. (520 aa)
	T265_10533	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (480 aa)
	T265_13374	Uncharacterized protein. (1180 aa)
	T265_00659	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (285 aa)
	T265_13175	Uncharacterized protein. (99 aa)
	T265_00936	Uncharacterized protein. (303 aa)
	T265_09265	BAR domain-containing protein. (173 aa)
	T265_00529	Uncharacterized protein. (921 aa)
	T265_08500	Uncharacterized protein. (418 aa)
	T265_00379	Protein kinase domain-containing protein. (1054 aa)
	T265_00185	Uncharacterized protein. (2063 aa)
	T265_14106	Uncharacterized protein. (512 aa)
	T265_05041	Uncharacterized protein. (2064 aa)
	T265_13639	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (331 aa)
	T265_03432	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (243 aa)
	T265_03208	Uncharacterized protein; Belongs to the peptidase C1 family. (437 aa)
	T265_03213	Papain family cysteine protease; Belongs to the peptidase C1 family. (372 aa)
	T265_13018	Non-specific serine/threonine protein kinase. (751 aa)
	T265_02419	WD_REPEATS_REGION domain-containing protein. (2272 aa)
	T265_02327	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (342 aa)
	T265_01444	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (384 aa)
	T265_01309	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (412 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00185	T265_00379	A0A075AD27	A0A075AD05	Uncharacterized protein.	Protein kinase domain-containing protein.	0.990
T265_00185	T265_00529	A0A075AD27	A0A075A5Q8	Uncharacterized protein.	Uncharacterized protein.	0.430
T265_00185	T265_01981	A0A075AD27	A0A075A0W5	Uncharacterized protein.	Uncharacterized protein.	0.879
T265_00185	T265_02386	A0A075AD27	A0A074ZW35	Uncharacterized protein.	Uncharacterized protein.	0.893
T265_00185	T265_02419	A0A075AD27	A0A075AIC0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.477
T265_00185	T265_02979	A0A075AD27	A0A074ZT89	Uncharacterized protein.	DUF4206 domain-containing protein.	0.838
T265_00185	T265_03302	A0A075AD27	A0A074ZWI7	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.999
T265_00185	T265_04419	A0A075AD27	A0A074ZZT6	Uncharacterized protein.	Autophagy-related protein 3.	0.894
T265_00185	T265_07624	A0A075AD27	A0A074ZN78	Uncharacterized protein.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.465
T265_00185	T265_09101	A0A075AD27	A0A074ZHX8	Uncharacterized protein.	Uncharacterized protein.	0.497
T265_00185	T265_09265	A0A075AD27	A0A075A5N2	Uncharacterized protein.	BAR domain-containing protein.	0.439
T265_00185	T265_09850	A0A075AD27	A0A074Z8P1	Uncharacterized protein.	Uncharacterized protein.	0.892
T265_00185	T265_09866	A0A075AD27	A0A074Z490	Uncharacterized protein.	SNARE domain protein.	0.506
T265_00185	T265_09902	A0A075AD27	A0A074Z8G6	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.457
T265_00185	T265_11834	A0A075AD27	A0A074YXI0	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.725
T265_00185	T265_12945	A0A075AD27	A0A074ZZU7	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.884
T265_00185	T265_13018	A0A075AD27	A0A075AIA4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.679
T265_00185	T265_13374	A0A075AD27	A0A075A1I4	Uncharacterized protein.	Uncharacterized protein.	0.694
T265_00185	T265_14820	A0A075AD27	A0A074Z5Z9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.887
T265_00185	T265_15019	A0A075AD27	A0A074Z850	Uncharacterized protein.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.657