25 items (Hucho hucho) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHHUP00000006922	MPN domain-containing protein. (359 aa)
	ENSHHUP00000061861	AAA domain-containing protein; Belongs to the AAA ATPase family. (462 aa)
	PSMD12	Proteasome 26S subunit, non-ATPase 12. (462 aa)
	ENSHHUP00000068094	PCI domain-containing protein. (528 aa)
	PSMD2-2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (900 aa)
	ENSHHUP00000070252	AAA_lid_3 domain-containing protein. (215 aa)
	ENSHHUP00000075328	Proteasome 26S subunit, non-ATPase 8. (242 aa)
	ENSHHUP00000075432	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	PSMD7	Proteasome 26S subunit, non-ATPase 7. (325 aa)
	ENSHHUP00000091505	Proteasome 26S subunit, non-ATPase 12. (482 aa)
	ENSHHUP00000060196	Uncharacterized protein. (355 aa)
	PSMD2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (898 aa)
	ENSHHUP00000055892	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (402 aa)
	ENSHHUP00000049998	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (956 aa)
	PSMC1	Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family. (440 aa)
	ENSHHUP00000038492	Proteasome 26S subunit, non-ATPase 7. (358 aa)
	ENSHHUP00000032237	AAA domain-containing protein; Belongs to the AAA ATPase family. (440 aa)
	ENSHHUP00000025139	SEM1, 26S proteasome complex subunit. (70 aa)
	ENSHHUP00000021480	SEM1, 26S proteasome complex subunit. (68 aa)
	ENSHHUP00000017701	Proteasome 26S subunit, non-ATPase 3. (515 aa)
	ENSHHUP00000007481	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (347 aa)
	PSMC6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (394 aa)
	ENSHHUP00000006451	MPN domain-containing protein. (319 aa)
	ENSHHUP00000002850	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (993 aa)
	ENSHHUP00000000416	Proteasome 26S subunit, non-ATPase 4. (377 aa)

Your Current Organism:

Hucho hucho

NCBI taxonomy Id: 62062
Other names: H. hucho, Hucho hucho hucho, huchen

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHHUP00000000416	ENSHHUP00000002850	ENSHHUP00000000416	ENSHHUP00000002850	Proteasome 26S subunit, non-ATPase 4.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.993
ENSHHUP00000000416	ENSHHUP00000006451	ENSHHUP00000000416	ENSHHUP00000006451	Proteasome 26S subunit, non-ATPase 4.	MPN domain-containing protein.	0.993
ENSHHUP00000000416	ENSHHUP00000006922	ENSHHUP00000000416	ENSHHUP00000006922	Proteasome 26S subunit, non-ATPase 4.	MPN domain-containing protein.	0.993
ENSHHUP00000000416	ENSHHUP00000007481	ENSHHUP00000000416	ENSHHUP00000007481	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.992
ENSHHUP00000000416	ENSHHUP00000017701	ENSHHUP00000000416	ENSHHUP00000017701	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, non-ATPase 3.	0.996
ENSHHUP00000000416	ENSHHUP00000021480	ENSHHUP00000000416	ENSHHUP00000021480	Proteasome 26S subunit, non-ATPase 4.	SEM1, 26S proteasome complex subunit.	0.958
ENSHHUP00000000416	ENSHHUP00000025139	ENSHHUP00000000416	ENSHHUP00000025139	Proteasome 26S subunit, non-ATPase 4.	SEM1, 26S proteasome complex subunit.	0.958
ENSHHUP00000000416	ENSHHUP00000032237	ENSHHUP00000000416	ENSHHUP00000032237	Proteasome 26S subunit, non-ATPase 4.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.996
ENSHHUP00000000416	ENSHHUP00000038492	ENSHHUP00000000416	ENSHHUP00000038492	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, non-ATPase 7.	0.993
ENSHHUP00000000416	ENSHHUP00000049998	ENSHHUP00000000416	ENSHHUP00000049998	Proteasome 26S subunit, non-ATPase 4.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.993
ENSHHUP00000000416	ENSHHUP00000055892	ENSHHUP00000000416	ENSHHUP00000055892	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.992
ENSHHUP00000000416	ENSHHUP00000061861	ENSHHUP00000000416	ENSHHUP00000061861	Proteasome 26S subunit, non-ATPase 4.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.996
ENSHHUP00000000416	ENSHHUP00000068094	ENSHHUP00000000416	ENSHHUP00000068094	Proteasome 26S subunit, non-ATPase 4.	PCI domain-containing protein.	0.996
ENSHHUP00000000416	ENSHHUP00000070252	ENSHHUP00000000416	ENSHHUP00000070252	Proteasome 26S subunit, non-ATPase 4.	AAA_lid_3 domain-containing protein.	0.996
ENSHHUP00000000416	ENSHHUP00000075328	ENSHHUP00000000416	ENSHHUP00000075328	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, non-ATPase 8.	0.999
ENSHHUP00000000416	ENSHHUP00000075432	ENSHHUP00000000416	ENSHHUP00000075432	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, non-ATPase 13.	0.999
ENSHHUP00000000416	ENSHHUP00000091505	ENSHHUP00000000416	ENSHHUP00000091505	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, non-ATPase 12.	0.998
ENSHHUP00000000416	PSMC1	ENSHHUP00000000416	ENSHHUP00000042111	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family.	0.996
ENSHHUP00000000416	PSMC6	ENSHHUP00000000416	ENSHHUP00000060821	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.992
ENSHHUP00000000416	PSMD12	ENSHHUP00000000416	ENSHHUP00000064924	Proteasome 26S subunit, non-ATPase 4.	Proteasome 26S subunit, non-ATPase 12.	0.998