STRINGSTRING
EGR_10538 EGR_10538 EGR_01052 EGR_01052 EGR_01053 EGR_01053 EGR_10953 EGR_10953 EGR_10388 EGR_10388 EGR_10952 EGR_10952 EGR_09113 EGR_09113 EGR_05641 EGR_05641 EGR_04689 EGR_04689 EGR_06849 EGR_06849 EGR_04370 EGR_04370 EGR_04225 EGR_04225
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_10538Histone H3; Belongs to the histone H3 family. (136 aa)
EGR_01052Histone H2A; Belongs to the histone H2A family. (128 aa)
EGR_01053Histone H2B; Belongs to the histone H2B family. (122 aa)
EGR_10953Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
EGR_10388Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
EGR_10952Histone H2B; Belongs to the histone H2B family. (122 aa)
EGR_09113Histone H3-like centromeric protein cnp1. (216 aa)
EGR_05641Histone lysine demethylase PHF8. (834 aa)
EGR_04689Core histone macro-H2A.1; Belongs to the histone H2A family. (363 aa)
EGR_06849Histone H2A; Belongs to the histone H2A family. (189 aa)
EGR_04370Histone-lysine N-methyltransferase SETD2. (1430 aa)
EGR_04225Lysine-specific demethylase 6A. (2415 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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