STRINGSTRING
EGR_00281 EGR_00281 EGR_09782 EGR_09782 EGR_10155 EGR_10155 EGR_07949 EGR_07949 EGR_10118 EGR_10118 EGR_09348 EGR_09348 EGR_09338 EGR_09338 EGR_06950 EGR_06950 EGR_06708 EGR_06708 EGR_03485 EGR_03485 EGR_10785 EGR_10785 EGR_05858 EGR_05858 EGR_10255 EGR_10255 EGR_01426 EGR_01426 EGR_00859 EGR_00859 EGR_08889 EGR_08889 EGR_08849 EGR_08849 EGR_00658 EGR_00658 EGR_05359 EGR_05359 EGR_00659 EGR_00659
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_00281Polyubiquitin. (234 aa)
EGR_09782Ubiquitin carboxyl-terminal hydrolase. (632 aa)
EGR_10155Ubiquitin hydrolase; Belongs to the peptidase C19 family. (530 aa)
EGR_07949WD repeat-containing protein 20. (491 aa)
EGR_10118Ras GTPase-activating protein-binding protein. (412 aa)
EGR_09348OTU domain-containing protein 6B. (354 aa)
EGR_09338Ubiquitin hydrolase. (419 aa)
EGR_06950Ubiquitin carboxyl-terminal hydrolase. (461 aa)
EGR_06708Ubiquitin hydrolase; Belongs to the peptidase C19 family. (1273 aa)
EGR_03485Ubiquitin hydrolase; Belongs to the peptidase C19 family. (717 aa)
EGR_10785Ubiquitin-like protein 4A. (131 aa)
EGR_05858Ubiquitin hydrolase; Belongs to the peptidase C19 family. (804 aa)
EGR_10255Ubiquitin hydrolase. (171 aa)
EGR_01426Ubiquitin carboxyl-terminal hydrolase. (833 aa)
EGR_00859Ubiquitin hydrolase; Belongs to the peptidase C19 family. (1740 aa)
EGR_08889Ubiquitin hydrolase. (109 aa)
EGR_08849Ubiquitin-like domain-containing protein. (114 aa)
EGR_00658WD repeat-containing protein. (261 aa)
EGR_05359Ubiquitin hydrolase; Belongs to the peptidase C19 family. (1181 aa)
EGR_00659WD repeat-containing protein. (230 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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