STRINGSTRING
EGR_00851 EGR_00851 EGR_07425 EGR_07425 EGR_05978 EGR_05978 EGR_04800 EGR_04800 EGR_06673 EGR_06673 EGR_02953 EGR_02953 EGR_02052 EGR_02052 EGR_00528 EGR_00528 EGR_00364 EGR_00364 EGR_02795 EGR_02795 EGR_01160 EGR_01160 EGR_00376 EGR_00376 EGR_01432 EGR_01432
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_00851Cell cycle checkpoint protein RAD1. (299 aa)
EGR_07425Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (680 aa)
EGR_05978BRCA1-associated RING domain protein. (755 aa)
EGR_04800Serine/threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family. (2689 aa)
EGR_06673Nibrin. (626 aa)
EGR_02953PAX-interacting protein. (2074 aa)
EGR_02052Checkpoint protein HUS1. (1022 aa)
EGR_00528DNA topoisomerase 2-binding protein. (1313 aa)
EGR_00364DNA repair protein RAD50. (1377 aa)
EGR_02795Tumor suppressor p53-binding protein. (1108 aa)
EGR_01160Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family. (3794 aa)
EGR_00376Serine/threonine-protein kinase. (512 aa)
EGR_01432Cell cycle checkpoint control protein RAD9A. (456 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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