STRINGSTRING
EGR_01363 EGR_01363 EGR_04181 EGR_04181 EGR_08762 EGR_08762 EGR_09206 EGR_09206 EGR_08658 EGR_08658 EGR_02883 EGR_02883 EGR_02164 EGR_02164 EGR_01331 EGR_01331 EGR_02518 EGR_02518 EGR_06303 EGR_06303
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_01363Protein MAK16 homolog; Belongs to the MAK16 family. (260 aa)
EGR_04181RNA helicase. (529 aa)
EGR_08762Putative rRNA-processing protein EBP2. (309 aa)
EGR_09206Ribosome production factor. (296 aa)
EGR_08658Putative ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (490 aa)
EGR_02883Ribosomal L1 domain-containing protein. (392 aa)
EGR_02164Ribosomal RNA processing protein 1 B. (423 aa)
EGR_0133160S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (179 aa)
EGR_02518RNA-binding protein. (188 aa)
EGR_06303Ribosome biogenesis protein BRX1. (295 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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