STRINGSTRING
EGR_09981 EGR_09981 EGR_07660 EGR_07660 EGR_06960 EGR_06960 EGR_04866 EGR_04866 EGR_07254 EGR_07254 EGR_06653 EGR_06653 EGR_03467 EGR_03467 EGR_03092 EGR_03092 EGR_08465 EGR_08465 EGR_03150 EGR_03150 EGR_00880 EGR_00880 EGR_00636 EGR_00636 EGR_01450 EGR_01450 EGR_05705 EGR_05705 EGR_03939 EGR_03939 EGR_00644 EGR_00644 EGR_02071 EGR_02071
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_09981U3 small nucleolar ribonucleoprotein IMP4. (353 aa)
EGR_07660Kri1_C domain-containing protein. (1123 aa)
EGR_06960U3 small nucleolar ribonucleoprotein MPP10. (563 aa)
EGR_04866Small subunit processome component. (2968 aa)
EGR_07254Nucleolar complex protein. (407 aa)
EGR_06653U3 small nucleolar RNA-associated protein 4. (752 aa)
EGR_03467Transducin beta-like protein 3. (895 aa)
EGR_03092U3 small nucleolar ribonucleoprotein IMP3. (1743 aa)
EGR_08465WD repeat-containing protein 3. (1053 aa)
EGR_03150Pumilio domain-containing protein C14orf21. (631 aa)
EGR_00880Uncharacterized protein. (1824 aa)
EGR_00636Periodic tryptophan protein. (1017 aa)
EGR_01450U3 small nucleolar RNA-associated protein. (1112 aa)
EGR_05705WD repeat-containing protein. (1242 aa)
EGR_03939Nucleolar complex protein. (398 aa)
EGR_00644U3 small nucleolar RNA-associated protein. (594 aa)
EGR_02071Ribosome biogenesis protein BMS1. (1216 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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