STRINGSTRING
EGR_08337 EGR_08337 EGR_01346 EGR_01346 EGR_09524 EGR_09524 EGR_05783 EGR_05783 EGR_10065 EGR_10065 EGR_01257 EGR_01257 EGR_00356 EGR_00356 EGR_01324 EGR_01324 EGR_04373 EGR_04373 EGR_02392 EGR_02392 EGR_05627 EGR_05627 EGR_03384 EGR_03384 EGR_10921 EGR_10921 EGR_05336 EGR_05336 EGR_05612 EGR_05612 EGR_09834 EGR_09834 EGR_09180 EGR_09180
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_08337AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (552 aa)
EGR_01346Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (136 aa)
EGR_09524AP-3 complex subunit sigma-2. (194 aa)
EGR_05783AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
EGR_10065Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (552 aa)
EGR_01257Putative vesicle-associated membrane protein. (217 aa)
EGR_00356Signal recognition particle receptor subunit alpha. (646 aa)
EGR_01324Synaptobrevin YKT6; Belongs to the synaptobrevin family. (265 aa)
EGR_04373Trafficking protein particle complex subunit 4. (699 aa)
EGR_02392AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (439 aa)
EGR_05627AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (168 aa)
EGR_03384AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (389 aa)
EGR_10921Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (196 aa)
EGR_05336Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (318 aa)
EGR_05612AP-3 complex subunit sigma-1. (232 aa)
EGR_09834Trafficking protein particle complex subunit 2-like protein. (166 aa)
EGR_09180Trafficking protein particle complex subunit 2. (124 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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