STRINGSTRING
EGR_07443 EGR_07443 EGR_00528 EGR_00528 EGR_08520 EGR_08520 EGR_01009 EGR_01009 EGR_00727 EGR_00727 EGR_02052 EGR_02052 EGR_02953 EGR_02953 EGR_02795 EGR_02795 EGR_02248 EGR_02248 EGR_05295 EGR_05295 EGR_01127 EGR_01127 EGR_05568 EGR_05568 EGR_05978 EGR_05978 EGR_06673 EGR_06673
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_07443Replication factor C subunit 1. (1128 aa)
EGR_00528DNA topoisomerase 2-binding protein. (1313 aa)
EGR_08520RNA polymerase II subunit A. (1242 aa)
EGR_01009Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (609 aa)
EGR_00727DNA repair protein XRCC1. (807 aa)
EGR_02052Checkpoint protein HUS1. (1022 aa)
EGR_02953PAX-interacting protein. (2074 aa)
EGR_02795Tumor suppressor p53-binding protein. (1108 aa)
EGR_02248DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (907 aa)
EGR_05295DNA ligase 4. (1064 aa)
EGR_01127Protein ECT2. (1557 aa)
EGR_05568SWI/SNF complex subunit SMARCC2. (1292 aa)
EGR_05978BRCA1-associated RING domain protein. (755 aa)
EGR_06673Nibrin. (626 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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