STRINGSTRING
EGR_00173 EGR_00173 EGR_04682 EGR_04682 EGR_04511 EGR_04511 EGR_05227 EGR_05227 EGR_04971 EGR_04971 EGR_06378 EGR_06378 EGR_00174 EGR_00174 EGR_09918 EGR_09918 EGR_04057 EGR_04057 EGR_05260 EGR_05260 EGR_04385 EGR_04385 EGR_01372 EGR_01372
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_00173Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit. (355 aa)
EGR_0468226S proteasome non-ATPase regulatory subunit 7. (332 aa)
EGR_04511STAM-binding protein-like protein. (385 aa)
EGR_05227COP9 signalosome complex subunit 6. (370 aa)
EGR_0497126S proteasome non-ATPase regulatory subunit. (312 aa)
EGR_06378Nuclear protein localization protein. (659 aa)
EGR_0017426S proteasome regulatory subunit N11. (210 aa)
EGR_09918Eukaryotic translation initiation factor 3 subunit F; Belongs to the eIF-3 subunit F family. (273 aa)
EGR_04057Eukaryotic translation initiation factor 3 subunit H. (332 aa)
EGR_05260Pre-mRNA-processing-splicing factor 8. (2317 aa)
EGR_04385Neighbor of COX4. (194 aa)
EGR_01372COP9 signalosome complex subunit. (352 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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