STRINGSTRING
EGR_04274 EGR_04274 EGR_00450 EGR_00450 EGR_08602 EGR_08602 EGR_03441 EGR_03441 EGR_05977 EGR_05977 EGR_05629 EGR_05629
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_04274RBR-type E3 ubiquitin transferase. (633 aa)
EGR_00450RBR-type E3 ubiquitin transferase. (464 aa)
EGR_08602RBR-type E3 ubiquitin transferase. (500 aa)
EGR_03441RBR-type E3 ubiquitin transferase. (564 aa)
EGR_05977RBR-type E3 ubiquitin transferase. (404 aa)
EGR_05629E3 ubiquitin-protein ligase parkin. (397 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.