STRINGSTRING
EGR_10952 EGR_10952 EGR_00549 EGR_00549 EGR_02631 EGR_02631 EGR_02886 EGR_02886 EGR_04548 EGR_04548 EGR_06711 EGR_06711 EGR_07186 EGR_07186 EGR_02388 EGR_02388 EGR_02554 EGR_02554 EGR_07798 EGR_07798 EGR_03019 EGR_03019 EGR_01630 EGR_01630 EGR_03018 EGR_03018 EGR_02905 EGR_02905 EGR_06849 EGR_06849 EGR_03787 EGR_03787 EGR_04237 EGR_04237 EGR_04023 EGR_04023 EGR_04879 EGR_04879 EGR_08573 EGR_08573 EGR_06723 EGR_06723 EGR_06169 EGR_06169 EGR_06873 EGR_06873 EGR_07185 EGR_07185 EGR_07454 EGR_07454 EGR_07680 EGR_07680 EGR_11078 EGR_11078 EGR_08240 EGR_08240 EGR_08922 EGR_08922 EGR_09060 EGR_09060 EGR_10388 EGR_10388 EGR_10573 EGR_10573 EGR_10837 EGR_10837 EGR_09272 EGR_09272 EGR_10953 EGR_10953 EGR_01823 EGR_01823 EGR_01053 EGR_01053 EGR_04064 EGR_04064 EGR_09900 EGR_09900 EGR_03086 EGR_03086 EGR_02567 EGR_02567 EGR_01963 EGR_01963 EGR_02044 EGR_02044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EGR_10952Histone H2B; Belongs to the histone H2B family. (122 aa)
EGR_00549TFIIH basal transcription factor complex helicase subunit. (1180 aa)
EGR_02631Ubinuclein-2. (868 aa)
EGR_02886Uncharacterized protein. (1466 aa)
EGR_04548TFIIH basal transcription factor complex helicase XPB subunit. (886 aa)
EGR_06711General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (469 aa)
EGR_07186Transcriptional repressor p66-beta. (830 aa)
EGR_02388General transcription factor IIH subunit. (513 aa)
EGR_02554TATA-box-binding protein. (289 aa)
EGR_07798DNA excision repair protein ERCC-6. (1337 aa)
EGR_03019DNA-directed RNA polymerase I subunit rpa1. (1367 aa)
EGR_01630DNA-directed RNA polymerases I and III subunit RPAC1. (476 aa)
EGR_03018DNA-directed RNA polymerase I subunit RPA1. (886 aa)
EGR_02905Methyl-CpG-binding domain protein. (294 aa)
EGR_06849Histone H2A; Belongs to the histone H2A family. (189 aa)
EGR_03787Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (226 aa)
EGR_04237Metastasis-associated protein MTA2. (583 aa)
EGR_04023Chromodomain-helicase-DNA-binding protein. (2572 aa)
EGR_04879TATA box-binding protein-like protein. (220 aa)
EGR_08573Histone H2B; Belongs to the histone H2B family. (100 aa)
EGR_06723DNA-directed RNA polymerase I subunit RPA2; Belongs to the RNA polymerase beta chain family. (1082 aa)
EGR_06169Uncharacterized protein. (449 aa)
EGR_06873Histone-binding protein RBBP4. (431 aa)
EGR_07185P66_CC domain-containing protein. (548 aa)
EGR_07454Histone H2B; Belongs to the histone H2B family. (82 aa)
EGR_07680CDK-activating kinase assembly factor MAT1. (452 aa)
EGR_11078Histone H2B; Belongs to the histone H2B family. (142 aa)
EGR_08240Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
EGR_08922General transcription factor IIH subunit 5. (73 aa)
EGR_09060Metastasis-associated protein MTA3. (462 aa)
EGR_10388Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
EGR_10573Uncharacterized protein. (858 aa)
EGR_10837Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (147 aa)
EGR_09272TATA box-binding protein-like protein 2. (215 aa)
EGR_10953Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
EGR_01823DNA-directed RNA polymerases I, II, and III subunit RPABC2. (136 aa)
EGR_01053Histone H2B; Belongs to the histone H2B family. (122 aa)
EGR_04064DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (157 aa)
EGR_09900DNA-directed RNA polymerases I, II, and III subunit RPABC4. (68 aa)
EGR_03086DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
EGR_02567DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (153 aa)
EGR_01963DNA-directed RNA polymerases I, II, and III subunit RPABC1. (206 aa)
EGR_02044RNA polymerase I specific transcription initiation factor RRN3. (567 aa)
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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