(5 nodes) piRNA binding network (Anopheles funestus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182R304	Uncharacterized protein. (1855 aa)
	A0A182R493	Uncharacterized protein; Belongs to the argonaute family. (920 aa)
	A0A182RCZ1	Uncharacterized protein; Belongs to the argonaute family. (846 aa)
	A0A182RGE8	Uncharacterized protein; Belongs to the argonaute family. (892 aa)
	A0A182RJK9	Uncharacterized protein. (1214 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R304	A0A182R493	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.950
A0A182R304	A0A182RCZ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.950
A0A182R304	A0A182RGE8	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.984
A0A182R304	A0A182RJK9	Uncharacterized protein.	Uncharacterized protein.	0.744
A0A182R493	A0A182R304	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.950
A0A182R493	A0A182RCZ1	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the argonaute family.	0.956
A0A182R493	A0A182RGE8	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the argonaute family.	0.973
A0A182R493	A0A182RJK9	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.815
A0A182RCZ1	A0A182R304	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.950
A0A182RCZ1	A0A182R493	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the argonaute family.	0.956
A0A182RCZ1	A0A182RGE8	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the argonaute family.	0.932
A0A182RCZ1	A0A182RJK9	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.868
A0A182RGE8	A0A182R304	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.984
A0A182RGE8	A0A182R493	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the argonaute family.	0.973
A0A182RGE8	A0A182RCZ1	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the argonaute family.	0.932
A0A182RGE8	A0A182RJK9	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.909
A0A182RJK9	A0A182R304	Uncharacterized protein.	Uncharacterized protein.	0.744
A0A182RJK9	A0A182R493	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.815
A0A182RJK9	A0A182RCZ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.868
A0A182RJK9	A0A182RGE8	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.909