(29 nodes) Fatty acid beta-oxidation, and methylcrotonoyl-CoA carboxylase complex network (Anopheles funestus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182R6W9	Uncharacterized protein. (688 aa)
	A0A182R9B6	Uncharacterized protein. (428 aa)
	A0A182RCY5	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (707 aa)
	A0A182REX5	Uncharacterized protein. (416 aa)
	A0A182RFA8	Uncharacterized protein. (419 aa)
	A0A182RJB7	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (786 aa)
	A0A182RK19	Uncharacterized protein. (723 aa)
	A0A182RLJ8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (414 aa)
	A0A182RNK6	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
	A0A182RU85	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (771 aa)
	A0A182RUF2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
	A0A182RWJ2	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (694 aa)
	A0A182RXK0	Uncharacterized protein. (407 aa)
	A0A182RYX9	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (299 aa)
	A0A182RZ09	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (469 aa)
	A0A182RZM4	Uncharacterized protein. (322 aa)
	A0A1I8JUK1	Glutaryl-CoA dehydrogenase. (428 aa)
	A0A4Y0BDX8	Uncharacterized protein. (307 aa)
	A0A4Y0BE65	Uncharacterized protein. (293 aa)
	A0A4Y0BGB5	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (299 aa)
	A0A4Y0BK77	Uncharacterized protein. (589 aa)
	A0A4Y0BKR2	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. (523 aa)
	A0A4Y0BKX5	Uncharacterized protein. (293 aa)
	A0A4Y0BMI7	Uncharacterized protein. (315 aa)
	A0A4Y0BNE2	Uncharacterized protein. (307 aa)
	A0A4Y0BQ97	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (672 aa)
	A0A4Y0BQW0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (472 aa)
	A0A4Y0BRI7	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (671 aa)
	A0A4Y0BWK2	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (318 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R6W9	A0A182R9B6	Uncharacterized protein.	Uncharacterized protein.	0.974
A0A182R6W9	A0A182RCY5	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.653
A0A182R6W9	A0A182REX5	Uncharacterized protein.	Uncharacterized protein.	0.681
A0A182R6W9	A0A182RFA8	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A182R6W9	A0A182RJB7	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.653
A0A182R6W9	A0A182RK19	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A182R6W9	A0A182RLJ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.738
A0A182R6W9	A0A182RNK6	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.738
A0A182R6W9	A0A182RU85	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.942
A0A182R6W9	A0A182RUF2	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.840
A0A182R6W9	A0A182RWJ2	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.653
A0A182R6W9	A0A182RXK0	Uncharacterized protein.	Uncharacterized protein.	0.718
A0A182R6W9	A0A182RYX9	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.935
A0A182R6W9	A0A182RZ09	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.625
A0A182R6W9	A0A182RZM4	Uncharacterized protein.	Uncharacterized protein.	0.817
A0A182R6W9	A0A1I8JUK1	Uncharacterized protein.	Glutaryl-CoA dehydrogenase.	0.676
A0A182R6W9	A0A4Y0BDX8	Uncharacterized protein.	Uncharacterized protein.	0.651
A0A182R6W9	A0A4Y0BE65	Uncharacterized protein.	Uncharacterized protein.	0.651
A0A182R6W9	A0A4Y0BGB5	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.935
A0A182R6W9	A0A4Y0BK77	Uncharacterized protein.	Uncharacterized protein.	0.997