(5 nodes) Laminin B (Domain IV), and LDLR class B repeat network (Anopheles funestus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182RB94	Uncharacterized protein. (1292 aa)
	A0A182RBA3	Uncharacterized protein. (496 aa)
	A0A182RM40	Uncharacterized protein. (4691 aa)
	A0A4Y0BED1	Uncharacterized protein. (1342 aa)
	A0A4Y0BMZ2	Uncharacterized protein. (884 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182RB94	A0A182RBA3	Uncharacterized protein.	Uncharacterized protein.	0.913
A0A182RB94	A0A182RM40	Uncharacterized protein.	Uncharacterized protein.	0.748
A0A182RB94	A0A4Y0BED1	Uncharacterized protein.	Uncharacterized protein.	0.462
A0A182RB94	A0A4Y0BMZ2	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A182RBA3	A0A182RB94	Uncharacterized protein.	Uncharacterized protein.	0.913
A0A182RBA3	A0A182RM40	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A182RBA3	A0A4Y0BMZ2	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A182RM40	A0A182RB94	Uncharacterized protein.	Uncharacterized protein.	0.748
A0A182RM40	A0A182RBA3	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A182RM40	A0A4Y0BED1	Uncharacterized protein.	Uncharacterized protein.	0.748
A0A4Y0BED1	A0A182RB94	Uncharacterized protein.	Uncharacterized protein.	0.462
A0A4Y0BED1	A0A182RM40	Uncharacterized protein.	Uncharacterized protein.	0.748
A0A4Y0BED1	A0A4Y0BMZ2	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A4Y0BMZ2	A0A182RB94	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A4Y0BMZ2	A0A182RBA3	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A4Y0BMZ2	A0A4Y0BED1	Uncharacterized protein.	Uncharacterized protein.	0.746