(18 nodes) Copper ion binding, and Iron ion transmembrane transport network (Anopheles funestus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182R293	Uncharacterized protein. (227 aa)
	A0A182R337	Copper chaperone for superoxide dismutase. (244 aa)
	A0A182R3M4	CutC domain-containing protein. (266 aa)
	A0A182R5R6	Uncharacterized protein; Belongs to the multicopper oxidase family. (1016 aa)
	A0A182R6D9	Uncharacterized protein. (151 aa)
	A0A182R742	Mitoferrin; Belongs to the mitochondrial carrier (TC 2.A.29) family. (412 aa)
	A0A182R7V3	Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. (390 aa)
	A0A182RA08	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family. (217 aa)
	A0A182RA09	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family. (230 aa)
	A0A182RDV5	Uncharacterized protein. (613 aa)
	A0A182RJ43	Uncharacterized protein. (141 aa)
	A0A182RPK7	Uncharacterized protein. (570 aa)
	A0A1Y9HEB9	Uncharacterized protein; Belongs to the multicopper oxidase family. (718 aa)
	A0A1Y9HEL2	Laccase-like multicopper oxidase; Belongs to the multicopper oxidase family. (661 aa)
	A0A4Y0BGR9	Uncharacterized protein; Belongs to the multicopper oxidase family. (603 aa)
	A0A4Y0BNC9	HMA domain-containing protein. (944 aa)
	A0A4Y0BQM5	Uncharacterized protein. (209 aa)
	A0A4Y0BW32	Uncharacterized protein. (213 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R293	A0A182RPK7	Uncharacterized protein.	Uncharacterized protein.	0.824
A0A182R337	A0A182R3M4	Copper chaperone for superoxide dismutase.	CutC domain-containing protein.	0.538
A0A182R337	A0A182R5R6	Copper chaperone for superoxide dismutase.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.452
A0A182R337	A0A182R6D9	Copper chaperone for superoxide dismutase.	Uncharacterized protein.	0.513
A0A182R337	A0A182RDV5	Copper chaperone for superoxide dismutase.	Uncharacterized protein.	0.452
A0A182R337	A0A182RJ43	Copper chaperone for superoxide dismutase.	Uncharacterized protein.	0.529
A0A182R337	A0A182RPK7	Copper chaperone for superoxide dismutase.	Uncharacterized protein.	0.552
A0A182R337	A0A1Y9HEB9	Copper chaperone for superoxide dismutase.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.452
A0A182R337	A0A1Y9HEL2	Copper chaperone for superoxide dismutase.	Laccase-like multicopper oxidase; Belongs to the multicopper oxidase family.	0.452
A0A182R337	A0A4Y0BGR9	Copper chaperone for superoxide dismutase.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.452
A0A182R337	A0A4Y0BNC9	Copper chaperone for superoxide dismutase.	HMA domain-containing protein.	0.990
A0A182R337	A0A4Y0BQM5	Copper chaperone for superoxide dismutase.	Uncharacterized protein.	0.990
A0A182R337	A0A4Y0BW32	Copper chaperone for superoxide dismutase.	Uncharacterized protein.	0.990
A0A182R3M4	A0A182R337	CutC domain-containing protein.	Copper chaperone for superoxide dismutase.	0.538
A0A182R3M4	A0A182RJ43	CutC domain-containing protein.	Uncharacterized protein.	0.559
A0A182R3M4	A0A182RPK7	CutC domain-containing protein.	Uncharacterized protein.	0.529
A0A182R3M4	A0A4Y0BNC9	CutC domain-containing protein.	HMA domain-containing protein.	0.456
A0A182R3M4	A0A4Y0BQM5	CutC domain-containing protein.	Uncharacterized protein.	0.456
A0A182R3M4	A0A4Y0BW32	CutC domain-containing protein.	Uncharacterized protein.	0.456
A0A182R5R6	A0A182R337	Uncharacterized protein; Belongs to the multicopper oxidase family.	Copper chaperone for superoxide dismutase.	0.452