10 items (Anopheles funestus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182R8X4	Uncharacterized protein. (1992 aa)
	A0A182RG06	Uncharacterized protein. (1871 aa)
	A0A182RQ96	Uncharacterized protein. (235 aa)
	A0A182RRB4	Uncharacterized protein. (141 aa)
	A0A182RUV4	Uncharacterized protein. (668 aa)
	A0A4Y0AV06	BRCT domain-containing protein. (1575 aa)
	A0A4Y0B5Z4	Uncharacterized protein. (116 aa)
	A0A4Y0BG00	Uncharacterized protein. (206 aa)
	A0A4Y0BNX5	Peptidase C50 domain-containing protein. (531 aa)
	A0A4Y0BQ50	Ku domain-containing protein. (728 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R8X4	A0A182RUV4	Uncharacterized protein.	Uncharacterized protein.	0.592
A0A182R8X4	A0A4Y0AV06	Uncharacterized protein.	BRCT domain-containing protein.	0.707
A0A182R8X4	A0A4Y0BNX5	Uncharacterized protein.	Peptidase C50 domain-containing protein.	0.642
A0A182RG06	A0A182RUV4	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A182RG06	A0A4Y0BG00	Uncharacterized protein.	Uncharacterized protein.	0.708
A0A182RRB4	A0A182RUV4	Uncharacterized protein.	Uncharacterized protein.	0.631
A0A182RRB4	A0A4Y0AV06	Uncharacterized protein.	BRCT domain-containing protein.	0.707
A0A182RUV4	A0A182R8X4	Uncharacterized protein.	Uncharacterized protein.	0.592
A0A182RUV4	A0A182RG06	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A182RUV4	A0A182RRB4	Uncharacterized protein.	Uncharacterized protein.	0.631
A0A182RUV4	A0A4Y0AV06	Uncharacterized protein.	BRCT domain-containing protein.	0.848
A0A182RUV4	A0A4Y0B5Z4	Uncharacterized protein.	Uncharacterized protein.	0.631
A0A182RUV4	A0A4Y0BQ50	Uncharacterized protein.	Ku domain-containing protein.	0.631
A0A4Y0AV06	A0A182R8X4	BRCT domain-containing protein.	Uncharacterized protein.	0.707
A0A4Y0AV06	A0A182RRB4	BRCT domain-containing protein.	Uncharacterized protein.	0.707
A0A4Y0AV06	A0A182RUV4	BRCT domain-containing protein.	Uncharacterized protein.	0.848
A0A4Y0AV06	A0A4Y0B5Z4	BRCT domain-containing protein.	Uncharacterized protein.	0.707
A0A4Y0AV06	A0A4Y0BQ50	BRCT domain-containing protein.	Ku domain-containing protein.	0.707
A0A4Y0B5Z4	A0A182RUV4	Uncharacterized protein.	Uncharacterized protein.	0.631
A0A4Y0B5Z4	A0A4Y0AV06	Uncharacterized protein.	BRCT domain-containing protein.	0.707