22 items (Anopheles funestus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4Y0BEB8	Uncharacterized protein. (1571 aa)
	A0A182RXM8	BTB domain-containing protein. (126 aa)
	A0A182RVF7	Checkpoint protein; Belongs to the HUS1 family. (293 aa)
	A0A182RTA5	RING-type domain-containing protein. (259 aa)
	A0A182RSY5	Uncharacterized protein. (1571 aa)
	A0A182RRS7	Zinc-hook domain-containing protein. (1308 aa)
	A0A182RND2	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (339 aa)
	A0A182RJ55	Nucleolar protein 6. (848 aa)
	A0A182RIM3	Small ubiquitin-related modifier. (94 aa)
	A0A182RH52	Uncharacterized protein. (310 aa)
	A0A182RGL4	Uncharacterized protein. (887 aa)
	A0A182RB00	Uncharacterized protein. (7635 aa)
	A0A182R9F1	RING-type domain-containing protein. (315 aa)
	A0A182R5W4	RECA_2 domain-containing protein. (140 aa)
	A0A182R241	Small ubiquitin-related modifier. (93 aa)
	A0A4Y0BHD8	Uncharacterized protein. (191 aa)
	A0A4Y0BI68	Uncharacterized protein. (96 aa)
	A0A4Y0BIV3	Uncharacterized protein. (7591 aa)
	A0A4Y0BJE3	Uncharacterized protein. (528 aa)
	A0A4Y0BLA0	Rad60-SLD domain-containing protein. (82 aa)
	A0A4Y0BNK0	RING-type domain-containing protein. (161 aa)
	A0A4Y0BU86	Uncharacterized protein. (804 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R241	A0A182R5W4	Small ubiquitin-related modifier.	RECA_2 domain-containing protein.	0.555
A0A182R241	A0A182RGL4	Small ubiquitin-related modifier.	Uncharacterized protein.	0.508
A0A182R241	A0A182RND2	Small ubiquitin-related modifier.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.743
A0A182R241	A0A182RRS7	Small ubiquitin-related modifier.	Zinc-hook domain-containing protein.	0.691
A0A182R241	A0A4Y0BU86	Small ubiquitin-related modifier.	Uncharacterized protein.	0.623
A0A182R5W4	A0A182R241	RECA_2 domain-containing protein.	Small ubiquitin-related modifier.	0.555
A0A182R5W4	A0A182RGL4	RECA_2 domain-containing protein.	Uncharacterized protein.	0.787
A0A182R5W4	A0A182RH52	RECA_2 domain-containing protein.	Uncharacterized protein.	0.717
A0A182R5W4	A0A182RIM3	RECA_2 domain-containing protein.	Small ubiquitin-related modifier.	0.555
A0A182R5W4	A0A182RND2	RECA_2 domain-containing protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.991
A0A182R5W4	A0A182RRS7	RECA_2 domain-containing protein.	Zinc-hook domain-containing protein.	0.896
A0A182R5W4	A0A182RSY5	RECA_2 domain-containing protein.	Uncharacterized protein.	0.537
A0A182R5W4	A0A182RVF7	RECA_2 domain-containing protein.	Checkpoint protein; Belongs to the HUS1 family.	0.646
A0A182R5W4	A0A4Y0BEB8	RECA_2 domain-containing protein.	Uncharacterized protein.	0.537
A0A182R5W4	A0A4Y0BHD8	RECA_2 domain-containing protein.	Uncharacterized protein.	0.717
A0A182R5W4	A0A4Y0BI68	RECA_2 domain-containing protein.	Uncharacterized protein.	0.684
A0A182R5W4	A0A4Y0BJE3	RECA_2 domain-containing protein.	Uncharacterized protein.	0.684
A0A182R5W4	A0A4Y0BLA0	RECA_2 domain-containing protein.	Rad60-SLD domain-containing protein.	0.555
A0A182R5W4	A0A4Y0BU86	RECA_2 domain-containing protein.	Uncharacterized protein.	0.636
A0A182R9F1	A0A182RGL4	RING-type domain-containing protein.	Uncharacterized protein.	0.516