(14 nodes) Spectrin repeat network (Anopheles funestus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4Y0BI09	Uncharacterized protein. (7433 aa)
	A0A4Y0BQB5	Uncharacterized protein. (8719 aa)
	A0A4Y0BMB3	Uncharacterized protein. (2417 aa)
	A0A4Y0BL82	Uncharacterized protein. (7397 aa)
	A0A4Y0BJW0	Uncharacterized protein. (8410 aa)
	A0A4Y0BJL5	Uncharacterized protein. (2330 aa)
	A0A4Y0BJ60	Uncharacterized protein. (7963 aa)
	A0A4Y0BIG6	Uncharacterized protein. (1554 aa)
	A0A4Y0BIF5	Uncharacterized protein. (15906 aa)
	A0A4Y0B4N6	Uncharacterized protein. (4375 aa)
	A0A182RW25	Spectrin beta chain; Belongs to the spectrin family. (2361 aa)
	A0A182RT21	Uncharacterized protein. (4407 aa)
	A0A182RAD4	Uncharacterized protein. (1623 aa)
	A0A182R500	Uncharacterized protein. (896 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R500	A0A182RAD4	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A182R500	A0A4Y0BMB3	Uncharacterized protein.	Uncharacterized protein.	0.413
A0A182RAD4	A0A182R500	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A182RT21	A0A4Y0BI09	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A182RT21	A0A4Y0BJ60	Uncharacterized protein.	Uncharacterized protein.	0.438
A0A182RT21	A0A4Y0BJW0	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A182RT21	A0A4Y0BL82	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A182RT21	A0A4Y0BMB3	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A182RT21	A0A4Y0BQB5	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A182RW25	A0A4Y0BI09	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.573
A0A182RW25	A0A4Y0BJ60	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.438
A0A182RW25	A0A4Y0BJW0	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.573
A0A182RW25	A0A4Y0BL82	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.573
A0A182RW25	A0A4Y0BMB3	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.979
A0A182RW25	A0A4Y0BQB5	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.573
A0A4Y0B4N6	A0A4Y0BI09	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A4Y0B4N6	A0A4Y0BJ60	Uncharacterized protein.	Uncharacterized protein.	0.438
A0A4Y0B4N6	A0A4Y0BJW0	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A4Y0B4N6	A0A4Y0BL82	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A4Y0B4N6	A0A4Y0BMB3	Uncharacterized protein.	Uncharacterized protein.	0.973