(31 nodes) Cyclic nucleotide-monophosphate binding domain network (Anopheles funestus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182RHI3	Uncharacterized protein. (1303 aa)
	A0A4Y0BFN8	Uncharacterized protein. (378 aa)
	A0A182RZB6	Cyclic nucleotide-binding domain-containing protein. (583 aa)
	A0A182RWQ1	Cyclic nucleotide-binding domain-containing protein. (580 aa)
	A0A182RWG3	Cyclic nucleotide-binding domain-containing protein. (689 aa)
	A0A182RUA1	Cyclic nucleotide-binding domain-containing protein. (613 aa)
	A0A182RQ94	Cyclic nucleotide-binding domain-containing protein. (593 aa)
	A0A182RK93	Uncharacterized protein. (1261 aa)
	A0A182RII8	Uncharacterized protein. (1141 aa)
	A0A182R8P9	Cyclic nucleotide-binding domain-containing protein. (1030 aa)
	A0A4Y0BNV3	Uncharacterized protein. (1071 aa)
	A0A4Y0BPL9	Cyclic nucleotide-binding domain-containing protein. (992 aa)
	A0A4Y0BQZ8	Uncharacterized protein. (1068 aa)
	A0A4Y0BRY7	Uncharacterized protein. (1677 aa)
	A0A4Y0BTV6	Cyclic nucleotide-binding domain-containing protein. (1221 aa)
	A0A4Y0BWL9	Uncharacterized protein. (1701 aa)
	A0A4Y0BNJ7	Cyclic nucleotide-binding domain-containing protein. (1166 aa)
	A0A4Y0BM68	Cyclic nucleotide-binding domain-containing protein. (863 aa)
	A0A4Y0BLS1	Uncharacterized protein. (1121 aa)
	A0A4Y0BKT6	Cyclic nucleotide-binding domain-containing protein. (1215 aa)
	A0A4Y0BKA1	Uncharacterized protein. (324 aa)
	A0A4Y0BK16	Uncharacterized protein. (589 aa)
	A0A4Y0BJP4	Uncharacterized protein. (373 aa)
	A0A4Y0BJC7	Uncharacterized protein. (845 aa)
	A0A4Y0BJ23	Cyclic nucleotide-binding domain-containing protein. (1859 aa)
	A0A4Y0BIU7	Cyclic nucleotide-binding domain-containing protein. (1248 aa)
	A0A4Y0BIU1	Uncharacterized protein. (1010 aa)
	A0A4Y0BI08	Uncharacterized protein. (865 aa)
	A0A4Y0BHT5	Uncharacterized protein. (321 aa)
	A0A4Y0BH93	Uncharacterized protein. (322 aa)
	A0A4Y0BGE4	Uncharacterized protein. (939 aa)

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R8P9	A0A182RWG3	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.968
A0A182R8P9	A0A4Y0BJ23	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.954
A0A182R8P9	A0A4Y0BM68	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.965
A0A182RWG3	A0A182R8P9	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.968
A0A4Y0BFN8	A0A4Y0BHT5	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BFN8	A0A4Y0BJP4	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A4Y0BFN8	A0A4Y0BKA1	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BH93	A0A4Y0BHT5	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BH93	A0A4Y0BJP4	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A4Y0BH93	A0A4Y0BKA1	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BHT5	A0A4Y0BFN8	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BHT5	A0A4Y0BH93	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BJ23	A0A182R8P9	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.954
A0A4Y0BJP4	A0A4Y0BFN8	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A4Y0BJP4	A0A4Y0BH93	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A4Y0BKA1	A0A4Y0BFN8	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BKA1	A0A4Y0BH93	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A4Y0BM68	A0A182R8P9	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.965