STRINGSTRING
dacA dacA SKB29204.1 SKB29204.1 SKB33337.1 SKB33337.1 SKB36887.1 SKB36887.1 SKB39124.1 SKB39124.1 SKB39599.1 SKB39599.1 SKB41378.1 SKB41378.1 SKB41387.1 SKB41387.1 SKB45894.1 SKB45894.1 SKB47969.1 SKB47969.1 SKB50428.1 SKB50428.1 SKB51206.1 SKB51206.1 SKB51299.1 SKB51299.1 SKB56761.1 SKB56761.1 SKB57087.1 SKB57087.1 SKB57096.1 SKB57096.1 SKB57109.1 SKB57109.1 SKB57141.1 SKB57141.1 SKB57151.1 SKB57151.1 SKB65341.1 SKB65341.1 SKB69886.1 SKB69886.1 SKB71052.1 SKB71052.1 SKB73031.1 SKB73031.1 SKB85702.1 SKB85702.1 SKB85709.1 SKB85709.1 SKB85717.1 SKB85717.1 SKB85733.1 SKB85733.1 SKB85776.1 SKB85776.1 SKB87875.1 SKB87875.1 SKB88741.1 SKB88741.1 SKB88750.1 SKB88750.1 SKB89124.1 SKB89124.1 SKB89549.1 SKB89549.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dacATIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (260 aa)
SKB29204.1Hypothetical protein. (202 aa)
SKB33337.1Aspartyl protease. (144 aa)
SKB36887.1Helix-turn-helix domain-containing protein. (112 aa)
SKB39124.1Protein of unknown function. (212 aa)
SKB39599.1Polyketide cyclase / dehydrase and lipid transport. (137 aa)
SKB41378.1Hypothetical protein. (381 aa)
SKB41387.1Tetratricopeptide repeat-containing protein. (390 aa)
SKB45894.1Hypothetical protein. (190 aa)
SKB47969.1Tetratricopeptide repeat-containing protein. (845 aa)
SKB50428.1FAD dependent oxidoreductase. (432 aa)
SKB51206.1pRiA4b ORF-3-like protein. (195 aa)
SKB51299.1UbiA prenyltransferase family protein. (289 aa)
SKB56761.1Hypothetical protein. (883 aa)
SKB57087.1Protein TonB, links inner and outer membranes. (273 aa)
SKB57096.1Biopolymer transport protein ExbD. (135 aa)
SKB57109.1Biopolymer transport protein ExbB. (233 aa)
SKB57141.1Hypothetical protein. (577 aa)
SKB57151.1Tetratricopeptide repeat-containing protein. (1009 aa)
SKB65341.1Hypothetical protein. (178 aa)
SKB69886.1Putative porin. (663 aa)
SKB71052.1Hypothetical protein. (246 aa)
SKB73031.1Hypothetical protein. (326 aa)
SKB85702.1Transcriptional regulator, TetR family. (191 aa)
SKB85709.123S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (465 aa)
SKB85717.1Hypothetical protein. (132 aa)
SKB85733.1CarboxypepD_reg-like domain-containing protein. (253 aa)
SKB85776.1Outer membrane protein OmpA. (231 aa)
SKB87875.1Hypothetical protein. (370 aa)
SKB88741.116S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (393 aa)
SKB88750.1Hypothetical protein. (421 aa)
SKB89124.1Hypothetical protein. (315 aa)
SKB89549.1WD40-like Beta Propeller Repeat. (1037 aa)
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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