STRINGSTRING
glrx-21 glrx-21 sod-5 sod-5 CBG01477 CBG01477 gpx-6 gpx-6 prdx-2 prdx-2 nsy-1 nsy-1 catp-6 catp-6 trxr-1 trxr-1 trxr-2 trxr-2 djr-1.1 djr-1.1 djr-1.2 djr-1.2 Cbr-gpn-1 Cbr-gpn-1 CBG08487 CBG08487 trx-2 trx-2 sod-4 sod-4 sod-1 sod-1 CBG11504 CBG11504 sod-2 sod-2 trx-1 trx-1 msra-1 msra-1 trx-4 trx-4 CBG14973 CBG14973 prdx-3 prdx-3 CBG18185 CBG18185 mpst-5 mpst-5 ctl-1 ctl-1 ctl-2 ctl-2 CBG20880 CBG20880 glrx-10 glrx-10 CBG06906 CBG06906
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glrx-21Protein CBR-GLRX-21. (119 aa)
sod-5Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (157 aa)
CBG01477Protein CBG01477. (372 aa)
gpx-6Glutathione peroxidase; Belongs to the glutathione peroxidase family. (191 aa)
prdx-2Protein CBR-PRDX-2. (195 aa)
nsy-1Protein CBR-NSY-1. (1577 aa)
catp-6Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1172 aa)
trxr-1Protein CBR-TRXR-1. (667 aa)
trxr-2Protein CBR-TRXR-2. (515 aa)
djr-1.1Protein CBR-DJR-1.1. (187 aa)
djr-1.2Protein CBR-DJR-1.2. (192 aa)
Cbr-gpn-1Protein CBR-GPN-1; Belongs to the glypican family. (1442 aa)
CBG08487Protein CBG08487. (279 aa)
trx-2Protein CBR-TRX-2. (145 aa)
sod-4Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (190 aa)
sod-1Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Required for normal brood size. May be involved in regulating mpk-1 phosphorylation downstream of phosphatase ptp-2 during oocyte maturation. Belongs to the Cu-Zn superoxide dismutase family. (180 aa)
CBG11504Protein CBG11504. (1007 aa)
sod-2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (223 aa)
trx-1Thioredoxin; Belongs to the thioredoxin family. (121 aa)
msra-1Protein CBG13148. (207 aa)
trx-4Thioredoxin; Belongs to the thioredoxin family. (107 aa)
CBG14973Protein CBG14973. (109 aa)
prdx-3Protein CBR-PRDX-3. (228 aa)
CBG18185Protein CBG18185. (63 aa)
mpst-5Protein CBR-MPST-6. (300 aa)
ctl-1Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (547 aa)
ctl-2Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (500 aa)
CBG20880Protein CBG20880. (596 aa)
glrx-10Protein CBR-GLRX-10. (105 aa)
CBG06906Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (152 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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