STRINGSTRING
sod-5 sod-5 CBG01477 CBG01477 gpx-6 gpx-6 catp-6 catp-6 djr-1.1 djr-1.1 djr-1.2 djr-1.2 sod-4 sod-4 sod-1 sod-1 CBG11504 CBG11504 sod-2 sod-2 ctl-1 ctl-1 ctl-2 ctl-2 CBG20880 CBG20880
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sod-5Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (157 aa)
CBG01477Protein CBG01477. (372 aa)
gpx-6Glutathione peroxidase; Belongs to the glutathione peroxidase family. (191 aa)
catp-6Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1172 aa)
djr-1.1Protein CBR-DJR-1.1. (187 aa)
djr-1.2Protein CBR-DJR-1.2. (192 aa)
sod-4Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (190 aa)
sod-1Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Required for normal brood size. May be involved in regulating mpk-1 phosphorylation downstream of phosphatase ptp-2 during oocyte maturation. Belongs to the Cu-Zn superoxide dismutase family. (180 aa)
CBG11504Protein CBG11504. (1007 aa)
sod-2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (223 aa)
ctl-1Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (547 aa)
ctl-2Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (500 aa)
CBG20880Protein CBG20880. (596 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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