STRINGSTRING
CBG24181 CBG24181 ran-3 ran-3 npp-14 npp-14 ima-3 ima-3 CBG07011 CBG07011 CBG09895 CBG09895 imb-2 imb-2 CBG12407 CBG12407 CBG14396 CBG14396 xpo-3 xpo-3 ran-1 ran-1 imb-1 imb-1 xpo-1 xpo-1 imb-3 imb-3 xpo-2 xpo-2 ima-1 ima-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG24181Protein CBG24181. (667 aa)
ran-3Protein CBR-RAN-3. (572 aa)
npp-14Protein CBR-NPP-14. (1445 aa)
ima-3Importin subunit alpha; Belongs to the importin alpha family. (513 aa)
CBG07011Snurportin-1; Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. Belongs to the snurportin family. (332 aa)
CBG09895Protein CBG09895. (959 aa)
imb-2Protein CBR-IMB-2. (941 aa)
CBG12407Protein CBG12407. (467 aa)
CBG14396Protein CBG14396. (261 aa)
xpo-3Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (966 aa)
ran-1GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
imb-1Protein CBR-IMB-1. (930 aa)
xpo-1Protein CBR-XPO-1. (1075 aa)
imb-3Protein CBR-IMB-3. (1112 aa)
xpo-2Protein CBR-XPO-2. (949 aa)
ima-1Protein CBR-IMA-1. (525 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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