(17 nodes) Mixed, incl. ADP transport, and Mitochondrial citrate transmembrane transport network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG24492	Protein CBG24492. (215 aa)
	CBG03436	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	Cbr-tag-316	Protein CBR-TAG-316; Belongs to the mitochondrial carrier (TC 2.A.29) family. (318 aa)
	CBG03753	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family. (400 aa)
	CBG06020	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family. (340 aa)
	vdac-1	Protein CBG05894. (283 aa)
	misc-1	Protein CBG07018; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)
	CBG07280	Protein CBG07280; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	CBG09342	Protein CBG09342; Belongs to the mitochondrial carrier (TC 2.A.29) family. (284 aa)
	Cbr-cyn-17	Protein CBR-CYN-17. (517 aa)
	CBG09959	Protein CBG09959; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	CBG10209	Protein CBG10209; Belongs to the mitochondrial carrier (TC 2.A.29) family. (415 aa)
	CBG10764	Protein CBG10764. (266 aa)
	pgrn-1	Protein CBR-PGRN-1. (291 aa)
	CBG17210	Protein CBG17210; Belongs to the mitochondrial carrier (TC 2.A.29) family. (297 aa)
	ant-1.2	Protein CBG20451; Belongs to the mitochondrial carrier (TC 2.A.29) family. (216 aa)
	ant-1.1	Protein CBR-TAG-61; Belongs to the mitochondrial carrier (TC 2.A.29) family. (300 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG03436	CBG03753	A8WV23	A8WWM6	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03436	CBG06020	A8WV23	A8X132	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03436	CBG07280	A8WV23	A8X530	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG07280; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.413
CBG03436	CBG09959	A8WV23	A8XA18	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG09959; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.413
CBG03436	CBG10209	A8WV23	A8XAU9	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG10209; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.413
CBG03436	CBG10764	A8WV23	A8XBQ9	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG10764.	0.449
CBG03436	pgrn-1	A8WV23	A8XM14	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-PGRN-1.	0.449
CBG03436	vdac-1	A8WV23	A8X1E2	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG05894.	0.921
CBG03753	CBG03436	A8WWM6	A8WV23	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	CBG09342	A8WWM6	A8X9B7	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG09342; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.491
CBG03753	CBG17210	A8WWM6	A8XQJ8	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG17210; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	Cbr-tag-316	A8WWM6	A8WWJ8	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-316; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	ant-1.1	A8WWM6	A8XZM1	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-61; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	ant-1.2	A8WWM6	A8XXT3	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG20451; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	vdac-1	A8WWM6	A8X1E2	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG05894.	0.585
CBG06020	CBG03436	A8X132	A8WV23	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG06020	CBG09342	A8X132	A8X9B7	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG09342; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.491
CBG06020	CBG17210	A8X132	A8XQJ8	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG17210; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG06020	Cbr-tag-316	A8X132	A8WWJ8	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-316; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG06020	ant-1.1	A8X132	A8XZM1	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-61; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.544