STRINGSTRING
CBG01775 CBG01775 pdpr-1 pdpr-1 agxt-1 agxt-1 gldc-1 gldc-1 pacs-1 pacs-1 CBG05074 CBG05074 CBG05075 CBG05075 alh-3 alh-3 gcsh-1 gcsh-1 adss-1 adss-1 gcst-1 gcst-1 CBG10863 CBG10863 gcsh-2 gcsh-2 CBG12218 CBG12218 dhfr-1 dhfr-1 CBG12888 CBG12888 CBG12961 CBG12961 daao-1 daao-1 CBG14872 CBG14872 CBG15194 CBG15194 dao-3 dao-3 atic-1 atic-1 CBG17652 CBG17652 ppat-1 ppat-1 pfas-1 pfas-1 tyms-1 tyms-1 metr-1 metr-1 CBG20736 CBG20736 CBG22021 CBG22021 CBG22093 CBG22093 CBG27847 CBG27847 adsl-1 adsl-1 mel-32 mel-32
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG01775Protein CBG01775. (264 aa)
pdpr-1Protein CBG02210. (885 aa)
agxt-1Serine--pyruvate aminotransferase. (413 aa)
gldc-1Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (985 aa)
pacs-1Protein CBG03675. (422 aa)
CBG05074Protein CBG05074. (399 aa)
CBG05075Protein CBG05075. (387 aa)
alh-310-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. (923 aa)
gcsh-1Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (148 aa)
adss-1Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family. (435 aa)
gcst-1Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (403 aa)
CBG10863Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. (1019 aa)
gcsh-2Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (146 aa)
CBG12218Protein CBG12218. (228 aa)
dhfr-1Protein CBG12356; Belongs to the dihydrofolate reductase family. (189 aa)
CBG12888Protein CBG12888; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
CBG12961Protein CBG12961. (278 aa)
daao-1D-amino-acid oxidase; Catalyzes oxidative deamination of D-amino acids, in particular D-alanine, and could be responsible for the degradation of diet-derived D-alanine in the intestine. Acts on a variety of D-amino acids with greater preference towards those with basic and aromatic groups followed by those bearing neutral groups. Has no activity against acidic D-amino acids, L-amino acids or N-methyl-L-aspartic acid. May play a role in egg-laying events and early development. (329 aa)
CBG14872Protein CBG14872. (281 aa)
CBG15194Protein CBG15194. (458 aa)
dao-3Protein CBR-DAO-3. (301 aa)
atic-1Protein CBG17698. (615 aa)
CBG17652Protein CBG17652. (427 aa)
ppat-1Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (480 aa)
pfas-1Protein CBG18026. (1337 aa)
tyms-1Protein CBG20269. (315 aa)
metr-1Probable methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity). (1273 aa)
CBG20736Protein CBG20736; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (322 aa)
CBG22021Phosphoserine aminotransferase. (369 aa)
CBG22093Protein CBG22093. (857 aa)
CBG27847Protein CBG27847. (642 aa)
adsl-1Adenylosuccinate lyase; Catalyzes two non-sequential steps in de novo AMP synthesis: converts (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate (SAICAR) to fumarate plus 5-amino-1-(5-phospho-D- ribosyl)imidazole-4-carboxamide, and thereby also contributes to de novo IMP synthesis, and converts succinyladenosine monophosphate (SAMP) to AMP and fumarate; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (478 aa)
mel-32Serine hydroxymethyltransferase; Interconversion of serine and glycine. (511 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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