(19 nodes) Cysteine biosynthetic process, and Methionine metabolic process network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cth-2	Protein CBG24746. (392 aa)
	CBG24871	Protein CBG24871. (125 aa)
	CBG25013	Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (338 aa)
	cysl-2	Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (337 aa)
	mtrr-1	Protein CBR-MTRR-1. (683 aa)
	cbs-1	Protein CBR-CBS-2. (701 aa)
	cysl-1	Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (341 aa)
	pps-1	Protein CBR-PPS-1. (668 aa)
	CBG06975	Protein CBG06975. (423 aa)
	CBG10206	Protein CBG10206. (425 aa)
	cysl-3	Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (337 aa)
	ahcy-1	Adenosylhomocysteinase. (437 aa)
	mthf-1	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (724 aa)
	CBG15622	Protein CBG15622. (247 aa)
	CBG18761	Protein CBG18761. (470 aa)
	CBG19472	Protein CBG19472. (216 aa)
	cbl-1	Protein CBG22025. (414 aa)
	CBG27484	Protein CBG27484. (64 aa)
	flad-1	Molybdenum cofactor biosynthesis protein-like region; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme; In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily. (523 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG06975	CBG19472	A8X405	A8XVM5	Protein CBG06975.	Protein CBG19472.	0.716
CBG06975	CBG24871	A8X405	A8WLN5	Protein CBG06975.	Protein CBG24871.	0.716
CBG06975	CBG25013	A8X405	A8WLY8	Protein CBG06975.	Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.427
CBG06975	ahcy-1	A8X405	A8XGI1	Protein CBG06975.	Adenosylhomocysteinase.	0.610
CBG06975	cbl-1	A8X405	A8Y1D0	Protein CBG06975.	Protein CBG22025.	0.716
CBG06975	cbs-1	A8X405	A8WRM3	Protein CBG06975.	Protein CBR-CBS-2.	0.441
CBG06975	cth-2	A8X405	A8WLD9	Protein CBG06975.	Protein CBG24746.	0.716
CBG06975	flad-1	A8X405	Q626I0	Protein CBG06975.	Molybdenum cofactor biosynthesis protein-like region; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme; In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily.	0.573
CBG06975	mtrr-1	A8X405	A8WPE6	Protein CBG06975.	Protein CBR-MTRR-1.	0.666
CBG06975	pps-1	A8X405	A8WUZ3	Protein CBG06975.	Protein CBR-PPS-1.	0.581
CBG10206	CBG15622	A8XAV0	A8XME5	Protein CBG10206.	Protein CBG15622.	0.935
CBG10206	CBG18761	A8XAV0	A8XU26	Protein CBG10206.	Protein CBG18761.	0.806
CBG10206	CBG19472	A8XAV0	A8XVM5	Protein CBG10206.	Protein CBG19472.	0.464
CBG10206	CBG24871	A8XAV0	A8WLN5	Protein CBG10206.	Protein CBG24871.	0.464
CBG10206	ahcy-1	A8XAV0	A8XGI1	Protein CBG10206.	Adenosylhomocysteinase.	0.927
CBG10206	cbl-1	A8XAV0	A8Y1D0	Protein CBG10206.	Protein CBG22025.	0.464
CBG10206	cbs-1	A8XAV0	A8WRM3	Protein CBG10206.	Protein CBR-CBS-2.	0.920
CBG10206	cth-2	A8XAV0	A8WLD9	Protein CBG10206.	Protein CBG24746.	0.944
CBG10206	cysl-1	A8XAV0	A8WRN7	Protein CBG10206.	Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.920
CBG10206	cysl-2	A8XAV0	A8WP61	Protein CBG10206.	Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.920