STRINGSTRING
gcy-18 gcy-18 gcy-5 gcy-5 pde-5 pde-5 pdl-1 pdl-1 pde-3 pde-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gcy-18Guanylate cyclase. (1145 aa)
gcy-5Guanylate cyclase. (1242 aa)
pde-5Phosphodiesterase. (715 aa)
pdl-1Phosphodiesterase delta-like protein; Belongs to the PDE6D/unc-119 family. (159 aa)
pde-3Phosphodiesterase. (504 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.