STRINGSTRING
hmgs-1 hmgs-1 hmgr-1 hmgr-1 fdps-1 fdps-1 CBG20661 CBG20661 mvk-1 mvk-1 idi-1 idi-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hmgs-13-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (463 aa)
hmgr-13-hydroxy-3-methylglutaryl coenzyme A reductase. (555 aa)
fdps-1Protein CBR-FDPS-1; Belongs to the FPP/GGPP synthase family. (351 aa)
CBG20661Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (372 aa)
mvk-1Protein CBR-MVK-1. (715 aa)
idi-1Protein CBR-IDI-1. (239 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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